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Cluster: HRGMv2_0060_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0060_19 HRGMv2_0060_19_5 3912 5072 - GH23
pfam HRGMv2_0060_19 HRGMv2_0060_19_6 5292 6203 - TatD_DNase
peptidase HRGMv2_0060_19 HRGMv2_0060_19_7 6243 6827 - C56.UNW
TC HRGMv2_0060_19 HRGMv2_0060_19_8 6940 10350 - 3.A.1.122.13
NULL(UNKNOWN) HRGMv2_0060_19 HRGMv2_0060_19_9 10569 11141 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0060_19 HRGMv2_0060_19_10 11156 13027 - 2.A.36.3.1
pfam HRGMv2_0060_19 HRGMv2_0060_19_11 13246 13839 + Protoglobin
pfam HRGMv2_0060_19 HRGMv2_0060_19_12 13808 14413 + DNA_binding_1
TC HRGMv2_0060_19 HRGMv2_0060_19_13 14415 15737 - 2.A.120.1.1
Gene ID: HRGMv2_0060_19_5
Type: CAZyme
Location: 3912 - 5072 (-)
Gene ID: HRGMv2_0060_19_6
Type: pfam
Location: 5292 - 6203 (-)
Gene ID: HRGMv2_0060_19_7
Type: peptidase
Location: 6243 - 6827 (-)
Gene ID: HRGMv2_0060_19_8
Type: TC
Location: 6940 - 10350 (-)
Gene ID: HRGMv2_0060_19_9
Type:
Location: 10569 - 11141 (+)
Gene ID: HRGMv2_0060_19_10
Type: TC
Location: 11156 - 13027 (-)
Gene ID: HRGMv2_0060_19_11
Type: pfam
Location: 13246 - 13839 (+)
Gene ID: HRGMv2_0060_19_12
Type: pfam
Location: 13808 - 14413 (+)
Gene ID: HRGMv2_0060_19_13
Type: TC
Location: 14415 - 15737 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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