PROTEIN: HRGMv2_0060_19_9
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Protein File & Metadata
Source:
HRGMv2_0060_19_9.pdb
Genome ID:
Protein ID:
HRGMv2_0060_19_9
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Protein Sequence
MTDLIQIPVP NEGPITDKVK EIYERSFPPE EEIPLPELLK STQLDQVSFL AWIDPSLPAG 60 EDGAGNVVAL TFSFAFPDLF YLGFLAVDGR TRSAGYGSRI LTHFRERYGD VPQLLEIEPV 120 VREAGNYQQR LRRLKFYERN GFTVTNMLTH EADQTYRVLA RDGIVSPQRL EEALNSVTDD 180 PAYASRVTTD 190
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GQS1-F1-model_v4 | 3 | 184 | 1 | 175 | 0.8096 |
0.8643 |
| AF-Q5FAI7-F1-model_v4 | 2 | 163 | 1 | 146 | 0.7145 |
0.8318 |
| AF-Q9HVB7-F1-model_v4 | 1 | 163 | 2 | 148 | 0.7011 |
0.8233 |
| AF-P44305-F1-model_v4 | 2 | 163 | 1 | 146 | 0.6963 |
0.8132 |
| AF-P0A944-F1-model_v4 | 1 | 163 | 1 | 146 | 0.6953 |
0.817 |
| AF-A0A0H3GHX5-F1-model_v4 | 1 | 163 | 1 | 146 | 0.6914 |
0.8129 |
| AF-Q8ZJW4-F1-model_v4 | 1 | 163 | 1 | 146 | 0.6904 |
0.8117 |
| AF-K0EQ47-F1-model_v4 | 1 | 163 | 3 | 155 | 0.6805 |
0.8119 |
| AF-Q58QH5-F1-model_v4 | 1 | 163 | 1 | 165 | 0.6711 |
0.7527 |
| AF-Q03503-F1-model_v4 | 1 | 169 | 2 | 167 | 0.6693 |
0.7624 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Z4JVE6-F1-model_v4 | GT0 | 1 | 164 | 343 | 497 | 0.4426 |
0.7823 |
| AF-F2NJR4-F1-model_v4 | GT0 | 1 | 163 | 342 | 496 | 0.4384 |
0.7798 |
| AF-A0A1D8U245-F1-model_v4 | GT0 | 1 | 163 | 347 | 505 | 0.4374 |
0.7587 |
| AF-A7NHE6-F1-model_v4 | GT0 | 1 | 163 | 346 | 500 | 0.4362 |
0.7716 |
| AF-C0QA13-F1-model_v4 | GT0 | 1 | 163 | 353 | 507 | 0.4361 |
0.7741 |
| AF-A0A1D9GAF9-F1-model_v4 | GT0 | 1 | 163 | 347 | 501 | 0.4353 |
0.772 |
| WCJ58883.1 | GT0 | 1 | 163 | 346 | 500 | 0.435 |
0.7692 |
| AF-A0A6H1U2R0-F1-model_v4 | GT0 | 1 | 164 | 350 | 504 | 0.432 |
0.7685 |
| BDQ33002.1 | GT0 | 1 | 163 | 336 | 484 | 0.4224 |
0.768 |
| AF-A0A2Z4V0C6-F1-model_v4 | GH89 | 3 | 163 | 1 | 187 | 0.3853 |
0.7737 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q9RPB2 | GH16_18 | 1 | 163 | 388 | 577 | 0.4642 |
0.8155 |
| A0A2Z4V0C6 | GH89 | 3 | 163 | 1 | 187 | 0.3853 |
0.7737 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3ey5-assembly1.cif.gz_A | 3 | 186 | 1 | 176 | 0.7736 |
0.8315 |
| 3exn-assembly1.cif.gz_A | 1 | 163 | 3 | 154 | 0.6913 |
0.7966 |
| 8osp-assembly2.cif.gz_C | 1 | 163 | 4 | 174 | 0.679 |
0.7771 |
| 2cnt-assembly4.cif.gz_D | 1 | 163 | 1 | 146 | 0.6788 |
0.8065 |
| 5isv-assembly2.cif.gz_B | 1 | 163 | 1 | 146 | 0.6757 |
0.8118 |
| 2r7h-assembly1.cif.gz_A | 2 | 163 | 1 | 156 | 0.6741 |
0.7712 |
| 1tiq-assembly2.cif.gz_B | 2 | 163 | 1 | 162 | 0.6728 |
0.7635 |
| 3ne7-assembly1.cif.gz_A | 1 | 163 | 1 | 159 | 0.6694 |
0.7533 |
| 6ao7-assembly1.cif.gz_A-2 | 1 | 163 | 2 | 153 | 0.6577 |
0.7572 |
| 1tiq-assembly1.cif.gz_A | 1 | 163 | 1 | 170 | 0.6557 |
0.7526 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O31601-F1-model_v4 | 17 | 190 | 1 | 179 | 0.7258 |
0.8152 |
| AF-P44305-F1-model_v4 | 2 | 163 | 1 | 146 | 0.6963 |
0.8132 |
| AF-P0A947-F1-model_v4 | 1 | 163 | 1 | 146 | 0.6958 |
0.8176 |
| AF-P0A946-F1-model_v4 | 1 | 163 | 1 | 146 | 0.6956 |
0.8172 |
| AF-P0A944-F1-model_v4 | 1 | 163 | 1 | 146 | 0.6953 |
0.817 |
| AF-P0A945-F1-model_v4 | 1 | 163 | 1 | 146 | 0.6951 |
0.8168 |
| AF-Q8ZJW4-F1-model_v4 | 1 | 163 | 1 | 146 | 0.6904 |
0.8117 |
| AF-Q03503-F1-model_v4 | 1 | 169 | 2 | 167 | 0.6693 |
0.7624 |
| AF-Q9HL57-F1-model_v4 | 1 | 164 | 1 | 160 | 0.6666 |
0.7507 |
| AF-P10051-F1-model_v4 | 1 | 163 | 1 | 182 | 0.6395 |
0.7578 |