dbCAN Logo

Cluster: HRGMv2_0026_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0026_3 HRGMv2_0026_3_83 113310 114047 - 3.A.1.23.2
pfam HRGMv2_0026_3 HRGMv2_0026_3_84 114062 114871 - CbiQ
TC HRGMv2_0026_3 HRGMv2_0026_3_85 114864 115742 - 3.A.1.23.5
NULL(UNKNOWN) HRGMv2_0026_3 HRGMv2_0026_3_86 115742 115867 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0026_3 HRGMv2_0026_3_87 116312 117586 + 1.B.23.1.23
NULL(UNKNOWN) HRGMv2_0026_3 HRGMv2_0026_3_88 117772 118353 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0026_3 HRGMv2_0026_3_89 118678 119958 + 1.B.23.1.5
pfam HRGMv2_0026_3 HRGMv2_0026_3_90 121019 122941 + Sulfatase
pfam HRGMv2_0026_3 HRGMv2_0026_3_91 123147 124985 + Sulfatase
CAZyme HRGMv2_0026_3 HRGMv2_0026_3_92 125026 125781 + GT2
Gene ID: HRGMv2_0026_3_83
Type: TC
Location: 113310 - 114047 (-)
Gene ID: HRGMv2_0026_3_84
Type: pfam
Location: 114062 - 114871 (-)
Gene ID: HRGMv2_0026_3_85
Type: TC
Location: 114864 - 115742 (-)
Gene ID: HRGMv2_0026_3_86
Type:
Location: 115742 - 115867 (-)
Gene ID: HRGMv2_0026_3_87
Type: TC
Location: 116312 - 117586 (+)
Gene ID: HRGMv2_0026_3_88
Type:
Location: 117772 - 118353 (+)
Gene ID: HRGMv2_0026_3_89
Type: TC
Location: 118678 - 119958 (+)
Gene ID: HRGMv2_0026_3_90
Type: pfam
Location: 121019 - 122941 (+)
Gene ID: HRGMv2_0026_3_91
Type: pfam
Location: 123147 - 124985 (+)
Gene ID: HRGMv2_0026_3_92
Type: CAZyme
Location: 125026 - 125781 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List