PROTEIN: HRGMv2_0026_3_88
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Protein File & Metadata
Source:
HRGMv2_0026_3_88.pdb
Genome ID:
Protein ID:
HRGMv2_0026_3_88
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Protein Sequence
MKKLYRYLLM TVLALCLSIP AIAAEAASVA VLPLLNKVEG RTDVEQVYYS GAINAIKAQQ 60 GFMMVDNDEL TAVVEKHVTK GVLPNEATLK AIAAEAKVDI VIAMELDTLD YSVVRNFDES 120 RVTLDLQGYC VSYNAIDGKF VKHRIYDDSH TEETSMARWD WPLEQWGRNV KREVNRALKV 180 KKITIEAPRM TKL 193
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F8E3-F1-model_v4 | 26 | 182 | 35 | 207 | 0.5001 |
0.6593 |
| AF-Q0PC44-F1-model_v4 | 22 | 186 | 131 | 320 | 0.3972 |
0.6245 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A4Y6D315-F1-model_v4 | CBM20 , GH13 | 23 | 193 | 35 | 212 | 0.3661 |
0.6648 |
| AF-F8CJ39-F1-model_v4 | CBM20 , GH13 | 23 | 190 | 27 | 194 | 0.3631 |
0.6668 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6uxc-assembly2.cif.gz_B | 24 | 183 | 1 | 172 | 0.6258 |
0.7407 |
| 6uxc-assembly1.cif.gz_A | 26 | 183 | 1 | 163 | 0.6141 |
0.7177 |
| 5t11-assembly1.cif.gz_H | 24 | 182 | 12 | 137 | 0.5606 |
0.7353 |
| 5t11-assembly1.cif.gz_I | 24 | 180 | 12 | 135 | 0.5592 |
0.7384 |
| 5t10-assembly1.cif.gz_B | 24 | 182 | 13 | 140 | 0.5574 |
0.7279 |
| 5t0z-assembly1.cif.gz_B | 24 | 182 | 21 | 158 | 0.5572 |
0.7188 |
| 5t0z-assembly1.cif.gz_C | 25 | 181 | 22 | 156 | 0.5544 |
0.7255 |
| 5t0z-assembly1.cif.gz_A | 24 | 181 | 21 | 158 | 0.55 |
0.7096 |
| 4hrv-assembly1.cif.gz_B | 26 | 172 | 1 | 138 | 0.522 |
0.6524 |
| 3w1e-assembly1.cif.gz_A | 1 | 184 | 13 | 266 | 0.4794 |
0.6614 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q7DDE8-F1-model_v4 | 26 | 182 | 35 | 207 | 0.4975 |
0.656 |
| AF-B3CUF6-F1-model_v4 | 1 | 182 | 28 | 174 | 0.4247 |
0.7669 |
| AF-Q39PS9-F1-model_v4 | 21 | 182 | 31 | 161 | 0.4059 |
0.8018 |