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Cluster: GH158_114_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_189645 k141_189645_69 73336 74613 - 3.A.1.103.5
CAZyme k141_189645 k141_189645_70 74630 75763 - GT4
CAZyme k141_189645 k141_189645_71 75790 77808 - GT2 | GT2
pfam k141_189645 k141_189645_72 77825 78673 - ABC2_membrane
STP k141_189645 k141_189645_73 78916 79182 - PTS-HPr
TC k141_189645 k141_189645_74 79232 81181 - 4.A.2.1.20
STP k141_189645 k141_189645_75 81178 82083 - PfkB
TF k141_189645 k141_189645_76 82086 82829 - HTH_DeoR
CAZyme k141_189645 k141_189645_77 83209 84927 + CBM34 | GH13_20
Gene ID: k141_189645_69
Type: TC
Location: 73336 - 74613 (-)
Gene ID: k141_189645_70
Type: CAZyme
Location: 74630 - 75763 (-)
Gene ID: k141_189645_71
Type: CAZyme
Location: 75790 - 77808 (-)
Gene ID: k141_189645_72
Type: pfam
Location: 77825 - 78673 (-)
Gene ID: k141_189645_73
Type: STP
Location: 78916 - 79182 (-)
Gene ID: k141_189645_74
Type: TC
Location: 79232 - 81181 (-)
Gene ID: k141_189645_75
Type: STP
Location: 81178 - 82083 (-)
Gene ID: k141_189645_76
Type: TF
Location: 82086 - 82829 (-)
Gene ID: k141_189645_77
Type: CAZyme
Location: 83209 - 84927 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
RUG11200
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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