Genome Details
Selected Rep_genome_ID: GH158_114
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
RUG11200
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH158_114 | 2,420,666 | 99.33% | 0% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_4321 | 2,200,875 | 94.29% | 0% | United Republic of Tanzania | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| GH158_114_CGC3 | CGCFAM_00015 | Yes | 11 | 5 | |
| GH158_114_CGC1 | CGCFAM_00039 | Yes | 5 | 3 | |
| GH158_114_CGC24 | CGCFAM_00053 | Yes | 9 | 1 | |
| GH158_114_CGC16 | CGCFAM_00067 | Yes | 5 | 2 | galactan |
| GH158_114_CGC20 | CGCFAM_00189 | Yes | 16 | 10 | |
| GH158_114_CGC14 | CGCFAM_00262 | Yes | 4 | 1 | |
| GH158_114_CGC11 | CGCFAM_01770 | Yes | 3 | 1 | |
| GH158_114_CGC18 | CGCFAM_02287 | Yes | 3 | 1 | |
| GH158_114_CGC27 | CGCFAM_05629 | Yes | 3 | 1 | |
| GH158_114_CGC25 | CGCFAM_05841 | Yes | 5 | 1 | |
| GH158_114_CGC4 | CGCFAM_05920 | Yes | 6 | 1 | |
| GH158_114_CGC7 | CGCFAM_05921 | Yes | 3 | 1 |
Top CAZyme Families