Cluster: GH090_87_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: GH090_87
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_145246 | k141_145246_37 | 41546 | 42334 | + | 3.A.1.103.6 |
| TC | k141_145246 | k141_145246_38 | 42344 | 43090 | + | 3.A.1.103.1 |
| CAZyme | k141_145246 | k141_145246_39 | 43143 | 45221 | + | GT2 | GT2 |
| pfam | k141_145246 | k141_145246_40 | 45244 | 47130 | + | DUF6020 |
| CAZyme | k141_145246 | k141_145246_41 | 47173 | 48132 | + | GT2 |
Gene ID: k141_145246_37
Type: TC
Location: 41546 - 42334 (+)
Type: TC
Location: 41546 - 42334 (+)
Gene ID: k141_145246_38
Type: TC
Location: 42344 - 43090 (+)
Type: TC
Location: 42344 - 43090 (+)
Gene ID: k141_145246_39
Type: CAZyme
Location: 43143 - 45221 (+)
Type: CAZyme
Location: 43143 - 45221 (+)
Gene ID: k141_145246_40
Type: pfam
Location: 45244 - 47130 (+)
Type: pfam
Location: 45244 - 47130 (+)
Gene ID: k141_145246_41
Type: CAZyme
Location: 47173 - 48132 (+)
Type: CAZyme
Location: 47173 - 48132 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Laedolimicola
Species
Laedolimicola sp934373375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_145246_39 | vegetarian > omnivore | 1.07283 | 0.00174 |
| k141_145246_40 | vegetarian > omnivore | 1.32606 | 0.00174 |