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Cluster: GH090_87_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_163650 k141_163650_14 18533 19906 + 2.A.22.5.3
TF k141_163650 k141_163650_15 20143 20421 + HTH_3
pfam k141_163650 k141_163650_16 20408 21541 + HipA_C | Couple_hipA
CAZyme k141_163650 k141_163650_17 21664 23109 - GH77
NULL(UNKNOWN) k141_163650 k141_163650_18 23137 23376 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_163650 k141_163650_19 23412 24509 - 3.A.1.1.26
TF k141_163650 k141_163650_20 24598 25608 - LacI
TC k141_163650 k141_163650_21 25617 26426 - 3.A.1.1.45
TC k141_163650 k141_163650_22 26461 27312 - 3.A.1.1.45
TC k141_163650 k141_163650_23 27404 28750 - 3.A.1.1.45
Gene ID: k141_163650_14
Type: TC
Location: 18533 - 19906 (+)
Gene ID: k141_163650_15
Type: TF
Location: 20143 - 20421 (+)
Gene ID: k141_163650_16
Type: pfam
Location: 20408 - 21541 (+)
Gene ID: k141_163650_17
Type: CAZyme
Location: 21664 - 23109 (-)
Gene ID: k141_163650_18
Type:
Location: 23137 - 23376 (-)
Gene ID: k141_163650_19
Type: TC
Location: 23412 - 24509 (-)
Gene ID: k141_163650_20
Type: TF
Location: 24598 - 25608 (-)
Gene ID: k141_163650_21
Type: TC
Location: 25617 - 26426 (-)
Gene ID: k141_163650_22
Type: TC
Location: 26461 - 27312 (-)
Gene ID: k141_163650_23
Type: TC
Location: 27404 - 28750 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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