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Cluster: GH090_87_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_36535 k141_36535_31 36557 38047 - 4.A.7.1.1
TC k141_36535 k141_36535_32 38118 38576 - 4.A.7.1.2
pfam k141_36535 k141_36535_33 38603 39706 - Lactamase_B_2 | Lactamase_B_3
TC k141_36535 k141_36535_34 40090 41307 - 9.B.174.1.2
STP k141_36535 k141_36535_35 41386 42603 - Peptidase_M23
pfam k141_36535 k141_36535_36 42668 43594 - FtsX | FtsX_ECD
TC k141_36535 k141_36535_37 43566 44255 - 3.A.1.140.1
pfam k141_36535 k141_36535_38 44278 45366 - HTH_30 | GGDEF_2
TC k141_36535 k141_36535_39 45699 46562 + 2.A.115.1.2
NULL(UNKNOWN) k141_36535 k141_36535_40 46777 47229 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_36535 k141_36535_41 47348 47731 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_36535 k141_36535_42 47751 49790 - CBM48 | GH13_9
CAZyme k141_36535 k141_36535_43 49865 51217 - GH13_20
STP k141_36535 k141_36535_44 51260 51838 - TetR_N
STP k141_36535 k141_36535_45 52088 53020 + PfkB
TC k141_36535 k141_36535_46 53094 53915 - 4.A.6.1.19
TC k141_36535 k141_36535_47 53905 54684 - 4.A.6.1.19
TC k141_36535 k141_36535_48 54714 55181 - 4.A.6.1.19
TC k141_36535 k141_36535_49 55200 55616 - 4.A.6.1.19
Gene ID: k141_36535_31
Type: TC
Location: 36557 - 38047 (-)
Gene ID: k141_36535_32
Type: TC
Location: 38118 - 38576 (-)
Gene ID: k141_36535_33
Type: pfam
Location: 38603 - 39706 (-)
Gene ID: k141_36535_34
Type: TC
Location: 40090 - 41307 (-)
Gene ID: k141_36535_35
Type: STP
Location: 41386 - 42603 (-)
Gene ID: k141_36535_36
Type: pfam
Location: 42668 - 43594 (-)
Gene ID: k141_36535_37
Type: TC
Location: 43566 - 44255 (-)
Gene ID: k141_36535_38
Type: pfam
Location: 44278 - 45366 (-)
Gene ID: k141_36535_39
Type: TC
Location: 45699 - 46562 (+)
Gene ID: k141_36535_40
Type:
Location: 46777 - 47229 (+)
Gene ID: k141_36535_41
Type:
Location: 47348 - 47731 (-)
Gene ID: k141_36535_42
Type: CAZyme
Location: 47751 - 49790 (-)
Gene ID: k141_36535_43
Type: CAZyme
Location: 49865 - 51217 (-)
Gene ID: k141_36535_44
Type: STP
Location: 51260 - 51838 (-)
Gene ID: k141_36535_45
Type: STP
Location: 52088 - 53020 (+)
Gene ID: k141_36535_46
Type: TC
Location: 53094 - 53915 (-)
Gene ID: k141_36535_47
Type: TC
Location: 53905 - 54684 (-)
Gene ID: k141_36535_48
Type: TC
Location: 54714 - 55181 (-)
Gene ID: k141_36535_49
Type: TC
Location: 55200 - 55616 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_36535_31 vegetarian > omnivore 1.16793 0.00174
k141_36535_34 vegetarian > omnivore 1.25926 0.00174
k141_36535_39 vegetarian > omnivore 1.20954 0.00174
k141_36535_40 vegetarian > omnivore 1.48151 0.00174
k141_36535_44 vegetarian > vegan 1.40312 0.00694
k141_36535_45 vegetarian > omnivore 1.25551 0.00174
k141_36535_46 vegetarian > vegan 1.02724 0.00694
k141_36535_46 vegetarian > omnivore 1.68092 0.00174
k141_36535_47 vegetarian > omnivore 1.09610 0.00174
k141_36535_48 vegetarian > omnivore 1.28976 0.00174
k141_36535_48 vegetarian > vegan 1.37638 0.00694

🧭 Explore Read Mapping of CGC

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