Cluster: GH090_87_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: GH090_87
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_16067 | k141_16067_82 | 95988 | 97325 | + | 9.B.34.1.2 |
| TC | k141_16067 | k141_16067_83 | 97399 | 98079 | - | 2.A.122.1.4 |
| TC | k141_16067 | k141_16067_84 | 98072 | 98443 | - | 1.E.14.1.1 |
| pfam | k141_16067 | k141_16067_85 | 98569 | 99414 | + | Amidase_3 | SPOR |
| pfam | k141_16067 | k141_16067_86 | 99617 | 101422 | + | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| TC | k141_16067 | k141_16067_87 | 101433 | 102146 | + | 3.A.1.122.2 |
| TC | k141_16067 | k141_16067_88 | 102140 | 103426 | + | 3.A.1.122.2 |
| TF | k141_16067 | k141_16067_89 | 103599 | 105518 | + | HTH_11 | Mga |
| TC | k141_16067 | k141_16067_90 | 105615 | 105932 | + | 4.A.3.2.2 |
| TC | k141_16067 | k141_16067_91 | 105947 | 107275 | + | 4.A.3.2.9 |
| CAZyme | k141_16067 | k141_16067_92 | 107294 | 108691 | + | GH4 |
| TC | k141_16067 | k141_16067_93 | 108696 | 108998 | + | 4.A.3.2.7 |
Gene ID: k141_16067_82
Type: TC
Location: 95988 - 97325 (+)
Type: TC
Location: 95988 - 97325 (+)
Gene ID: k141_16067_83
Type: TC
Location: 97399 - 98079 (-)
Type: TC
Location: 97399 - 98079 (-)
Gene ID: k141_16067_84
Type: TC
Location: 98072 - 98443 (-)
Type: TC
Location: 98072 - 98443 (-)
Gene ID: k141_16067_85
Type: pfam
Location: 98569 - 99414 (+)
Type: pfam
Location: 98569 - 99414 (+)
Gene ID: k141_16067_86
Type: pfam
Location: 99617 - 101422 (+)
Type: pfam
Location: 99617 - 101422 (+)
Gene ID: k141_16067_87
Type: TC
Location: 101433 - 102146 (+)
Type: TC
Location: 101433 - 102146 (+)
Gene ID: k141_16067_88
Type: TC
Location: 102140 - 103426 (+)
Type: TC
Location: 102140 - 103426 (+)
Gene ID: k141_16067_89
Type: TF
Location: 103599 - 105518 (+)
Type: TF
Location: 103599 - 105518 (+)
Gene ID: k141_16067_90
Type: TC
Location: 105615 - 105932 (+)
Type: TC
Location: 105615 - 105932 (+)
Gene ID: k141_16067_91
Type: TC
Location: 105947 - 107275 (+)
Type: TC
Location: 105947 - 107275 (+)
Gene ID: k141_16067_92
Type: CAZyme
Location: 107294 - 108691 (+)
Type: CAZyme
Location: 107294 - 108691 (+)
Gene ID: k141_16067_93
Type: TC
Location: 108696 - 108998 (+)
Type: TC
Location: 108696 - 108998 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Laedolimicola
Species
Laedolimicola sp934373375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_16067_83 | vegetarian > vegan | 1.16471 | 0.00694 |
| k141_16067_84 | vegetarian > omnivore | 1.14433 | 0.00174 |
| k141_16067_84 | vegetarian > vegan | 1.32873 | 0.00694 |
| k141_16067_85 | vegetarian > omnivore | 1.17100 | 0.00174 |
| k141_16067_85 | vegetarian > vegan | 1.12018 | 0.00694 |
| k141_16067_86 | vegetarian > omnivore | 1.16840 | 0.00174 |
| k141_16067_86 | vegetarian > vegan | 1.32076 | 0.00694 |