dbCAN Logo

Cluster: GH043_bin.40_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_309250 k141_309250_200 222255 223190 + 1.A.35.1.2
pfam k141_309250 k141_309250_201 223211 225355 + S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
CAZyme k141_309250 k141_309250_202 225405 226826 - GT5
pfam k141_309250 k141_309250_203 226840 227961 - NTP_transferase | Hexapep_GlmU
pfam k141_309250 k141_309250_204 227966 229174 - NTP_transferase | Hexapep_GlmU
CAZyme k141_309250 k141_309250_205 229190 231070 - CBM48 | GH13_9
Gene ID: k141_309250_200
Type: TC
Location: 222255 - 223190 (+)
Gene ID: k141_309250_201
Type: pfam
Location: 223211 - 225355 (+)
Gene ID: k141_309250_202
Type: CAZyme
Location: 225405 - 226826 (-)
Gene ID: k141_309250_203
Type: pfam
Location: 226840 - 227961 (-)
Gene ID: k141_309250_204
Type: pfam
Location: 227966 - 229174 (-)
Gene ID: k141_309250_205
Type: CAZyme
Location: 229190 - 231070 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_309250_204 vegan > omnivore 1.36491 0.01604
k141_309250_204 vegetarian > omnivore 2.17453 0.00088

🧭 Explore Read Mapping of CGC

← Back to Cluster List