Cluster: GH021_63_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: GH021_63
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_259046 | k141_259046_10 | 12955 | 14145 | + | 3.B.1.1.2 |
| TF | k141_259046 | k141_259046_11 | 14271 | 14978 | + | LytTR |
| NULL(UNKNOWN) | k141_259046 | k141_259046_12 | 14978 | 16207 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_259046 | k141_259046_13 | 17100 | 19019 | + | GH2 |
| CAZyme | k141_259046 | k141_259046_14 | 19428 | 22427 | + | GH3 |
| TC | k141_259046 | k141_259046_15 | 22792 | 24354 | + | 2.A.2.3.2 |
| peptidase | k141_259046 | k141_259046_16 | 24661 | 25878 | + | M20.UPD |
| TC | k141_259046 | k141_259046_17 | 26154 | 27410 | - | 2.A.23.4.1 |
Gene ID: k141_259046_10
Type: TC
Location: 12955 - 14145 (+)
Type: TC
Location: 12955 - 14145 (+)
Gene ID: k141_259046_11
Type: TF
Location: 14271 - 14978 (+)
Type: TF
Location: 14271 - 14978 (+)
Gene ID: k141_259046_12
Type:
Location: 14978 - 16207 (+)
Type:
Location: 14978 - 16207 (+)
Gene ID: k141_259046_13
Type: CAZyme
Location: 17100 - 19019 (+)
Type: CAZyme
Location: 17100 - 19019 (+)
Gene ID: k141_259046_14
Type: CAZyme
Location: 19428 - 22427 (+)
Type: CAZyme
Location: 19428 - 22427 (+)
Gene ID: k141_259046_15
Type: TC
Location: 22792 - 24354 (+)
Type: TC
Location: 22792 - 24354 (+)
Gene ID: k141_259046_16
Type: peptidase
Location: 24661 - 25878 (+)
Type: peptidase
Location: 24661 - 25878 (+)
Gene ID: k141_259046_17
Type: TC
Location: 26154 - 27410 (-)
Type: TC
Location: 26154 - 27410 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.