Cluster: GH021_63_CGC36
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: GH021_63
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_19663 | k141_19663_56 | 60137 | 61039 | + | 3.A.1.24.5 |
| TC | k141_19663 | k141_19663_57 | 61174 | 62172 | + | 3.A.1.24.1 |
| TC | k141_19663 | k141_19663_58 | 62172 | 62870 | + | 3.A.1.24.5 |
| pfam | k141_19663 | k141_19663_59 | 63527 | 64063 | - | DUF5662 |
| pfam | k141_19663 | k141_19663_60 | 64067 | 65692 | - | Lactamase_B | RMMBL | Beta-Casp |
| CAZyme | k141_19663 | k141_19663_61 | 65710 | 68385 | - | GH25 |
| TC | k141_19663 | k141_19663_62 | 69102 | 70499 | - | 2.A.40.2.1 |
| NULL(UNKNOWN) | k141_19663 | k141_19663_63 | 70851 | 71750 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_19663 | k141_19663_64 | 72219 | 75161 | - | GH2 |
| sulfatase | k141_19663 | k141_19663_65 | 75448 | 76194 | + | S1_4 |
| NULL(UNKNOWN) | k141_19663 | k141_19663_66 | 76479 | 76607 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_19663 | k141_19663_67 | 76618 | 77748 | - | 3.B.1.1.5 |
| TC | k141_19663 | k141_19663_68 | 78207 | 79556 | - | 2.A.23.1.5 |
Gene ID: k141_19663_56
Type: TC
Location: 60137 - 61039 (+)
Type: TC
Location: 60137 - 61039 (+)
Gene ID: k141_19663_57
Type: TC
Location: 61174 - 62172 (+)
Type: TC
Location: 61174 - 62172 (+)
Gene ID: k141_19663_58
Type: TC
Location: 62172 - 62870 (+)
Type: TC
Location: 62172 - 62870 (+)
Gene ID: k141_19663_59
Type: pfam
Location: 63527 - 64063 (-)
Type: pfam
Location: 63527 - 64063 (-)
Gene ID: k141_19663_60
Type: pfam
Location: 64067 - 65692 (-)
Type: pfam
Location: 64067 - 65692 (-)
Gene ID: k141_19663_61
Type: CAZyme
Location: 65710 - 68385 (-)
Type: CAZyme
Location: 65710 - 68385 (-)
Gene ID: k141_19663_62
Type: TC
Location: 69102 - 70499 (-)
Type: TC
Location: 69102 - 70499 (-)
Gene ID: k141_19663_63
Type:
Location: 70851 - 71750 (+)
Type:
Location: 70851 - 71750 (+)
Gene ID: k141_19663_64
Type: CAZyme
Location: 72219 - 75161 (-)
Type: CAZyme
Location: 72219 - 75161 (-)
Gene ID: k141_19663_65
Type: sulfatase
Location: 75448 - 76194 (+)
Type: sulfatase
Location: 75448 - 76194 (+)
Gene ID: k141_19663_66
Type:
Location: 76479 - 76607 (-)
Type:
Location: 76479 - 76607 (-)
Gene ID: k141_19663_67
Type: TC
Location: 76618 - 77748 (-)
Type: TC
Location: 76618 - 77748 (-)
Gene ID: k141_19663_68
Type: TC
Location: 78207 - 79556 (-)
Type: TC
Location: 78207 - 79556 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.