Cluster: GH021_63_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: GH021_63
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_26162 | k141_26162_78 | 83910 | 85892 | + | GH42 |
| TF | k141_26162 | k141_26162_79 | 86023 | 87060 | + | LacI |
| pfam | k141_26162 | k141_26162_80 | 87375 | 88664 | + | SBP_bac_8 |
| TC | k141_26162 | k141_26162_81 | 88748 | 90193 | + | 3.A.1.1.27 |
| TC | k141_26162 | k141_26162_82 | 90190 | 91092 | + | 3.A.1.1.27 |
Gene ID: k141_26162_78
Type: CAZyme
Location: 83910 - 85892 (+)
Type: CAZyme
Location: 83910 - 85892 (+)
Gene ID: k141_26162_79
Type: TF
Location: 86023 - 87060 (+)
Type: TF
Location: 86023 - 87060 (+)
Gene ID: k141_26162_80
Type: pfam
Location: 87375 - 88664 (+)
Type: pfam
Location: 87375 - 88664 (+)
Gene ID: k141_26162_81
Type: TC
Location: 88748 - 90193 (+)
Type: TC
Location: 88748 - 90193 (+)
Gene ID: k141_26162_82
Type: TC
Location: 90190 - 91092 (+)
Type: TC
Location: 90190 - 91092 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.