Cluster: GH021_63_CGC26
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: GH021_63
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_283288 | k141_283288_16 | 17675 | 19036 | - | 2.A.66.1.33 |
| pfam | k141_283288 | k141_283288_17 | 19172 | 19999 | - | AP_endonuc_2 |
| CAZyme | k141_283288 | k141_283288_18 | 20012 | 21160 | - | GH105 |
| CAZyme | k141_283288 | k141_283288_19 | 21165 | 22718 | - | GH28 |
| TF | k141_283288 | k141_283288_20 | 22832 | 23695 | + | HTH_AraC | HTH_AraC |
| TC | k141_283288 | k141_283288_21 | 23859 | 24719 | - | 3.A.1.1.11 |
| TC | k141_283288 | k141_283288_22 | 24734 | 25645 | - | 3.A.1.1.11 |
| TC | k141_283288 | k141_283288_23 | 25746 | 27113 | - | 3.A.1.1.11 |
Gene ID: k141_283288_16
Type: TC
Location: 17675 - 19036 (-)
Type: TC
Location: 17675 - 19036 (-)
Gene ID: k141_283288_17
Type: pfam
Location: 19172 - 19999 (-)
Type: pfam
Location: 19172 - 19999 (-)
Gene ID: k141_283288_18
Type: CAZyme
Location: 20012 - 21160 (-)
Type: CAZyme
Location: 20012 - 21160 (-)
Gene ID: k141_283288_19
Type: CAZyme
Location: 21165 - 22718 (-)
Type: CAZyme
Location: 21165 - 22718 (-)
Gene ID: k141_283288_20
Type: TF
Location: 22832 - 23695 (+)
Type: TF
Location: 22832 - 23695 (+)
Gene ID: k141_283288_21
Type: TC
Location: 23859 - 24719 (-)
Type: TC
Location: 23859 - 24719 (-)
Gene ID: k141_283288_22
Type: TC
Location: 24734 - 25645 (-)
Type: TC
Location: 24734 - 25645 (-)
Gene ID: k141_283288_23
Type: TC
Location: 25746 - 27113 (-)
Type: TC
Location: 25746 - 27113 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger variabilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.