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Cluster: GH021_63_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_216693 k141_216693_8 5999 6262 + 8.A.8.1.4
pfam k141_216693 k141_216693_9 6328 8178 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TF k141_216693 k141_216693_10 8197 9444 + HTH_AraC
TC k141_216693 k141_216693_11 9444 11159 + 8.A.59.2.1
STP k141_216693 k141_216693_12 11143 12111 + Peripla_BP_1
TC k141_216693 k141_216693_13 12583 13629 + 3.A.1.2.3
TC k141_216693 k141_216693_14 13744 15252 + 3.A.1.2.3
TC k141_216693 k141_216693_15 15268 16251 + 3.A.1.2.3
NULL(UNKNOWN) k141_216693 k141_216693_16 16254 16487 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_216693 k141_216693_17 16856 17434 - Flavin_Reduct
CAZyme k141_216693 k141_216693_18 17431 18414 - GT2
Gene ID: k141_216693_8
Type: TC
Location: 5999 - 6262 (+)
Gene ID: k141_216693_9
Type: pfam
Location: 6328 - 8178 (+)
Gene ID: k141_216693_10
Type: TF
Location: 8197 - 9444 (+)
Gene ID: k141_216693_11
Type: TC
Location: 9444 - 11159 (+)
Gene ID: k141_216693_12
Type: STP
Location: 11143 - 12111 (+)
Gene ID: k141_216693_13
Type: TC
Location: 12583 - 13629 (+)
Gene ID: k141_216693_14
Type: TC
Location: 13744 - 15252 (+)
Gene ID: k141_216693_15
Type: TC
Location: 15268 - 16251 (+)
Gene ID: k141_216693_16
Type:
Location: 16254 - 16487 (+)
Gene ID: k141_216693_17
Type: pfam
Location: 16856 - 17434 (-)
Gene ID: k141_216693_18
Type: CAZyme
Location: 17431 - 18414 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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