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Cluster: DM001_35_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_147148 k141_147148_13 14296 16473 + 2.A.16.2.2
pfam k141_147148 k141_147148_14 16723 18759 + His_kinase | TPR_8 | TPR_8 | TPR_10
STP k141_147148 k141_147148_15 18821 19558 + Response_reg
CAZyme k141_147148 k141_147148_16 19698 21965 + GH92
TC k141_147148 k141_147148_17 21967 23124 - 3.A.11.1.3
TC k141_147148 k141_147148_18 23114 23896 - 3.A.1.27.5
TC k141_147148 k141_147148_19 23951 24697 - 3.A.1.27.1
TC k141_147148 k141_147148_20 24927 25769 + 1.B.42.1.2
Gene ID: k141_147148_13
Type: TC
Location: 14296 - 16473 (+)
Gene ID: k141_147148_14
Type: pfam
Location: 16723 - 18759 (+)
Gene ID: k141_147148_15
Type: STP
Location: 18821 - 19558 (+)
Gene ID: k141_147148_16
Type: CAZyme
Location: 19698 - 21965 (+)
Gene ID: k141_147148_17
Type: TC
Location: 21967 - 23124 (-)
Gene ID: k141_147148_18
Type: TC
Location: 23114 - 23896 (-)
Gene ID: k141_147148_19
Type: TC
Location: 23951 - 24697 (-)
Gene ID: k141_147148_20
Type: TC
Location: 24927 - 25769 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_147148_20 vegetarian > vegan 1.63995 0.01054

🧭 Explore Read Mapping of CGC

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