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Cluster: DM001_35_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_120961 k141_120961_3 966 4148 - CBM35 | GH97
TF k141_120961 k141_120961_4 4559 8116 + HTH_AraC
pfam k141_120961 k141_120961_5 8344 9849 + AcetylCoA_hydro | AcetylCoA_hyd_C
CAZyme k141_120961 k141_120961_6 9878 11152 + GT4
CAZyme k141_120961 k141_120961_7 11162 11938 + GT2
NULL(UNKNOWN) k141_120961 k141_120961_8 12074 12208 + NULL(UNKNOWN)
[View Structural Homologs]
STP k141_120961 k141_120961_9 12201 13085 - PfkB
TC k141_120961 k141_120961_10 13331 14542 - 2.A.1.7.17
CAZyme k141_120961 k141_120961_11 14550 16325 - GH32
Gene ID: k141_120961_3
Type: CAZyme
Location: 966 - 4148 (-)
Gene ID: k141_120961_4
Type: TF
Location: 4559 - 8116 (+)
Gene ID: k141_120961_5
Type: pfam
Location: 8344 - 9849 (+)
Gene ID: k141_120961_6
Type: CAZyme
Location: 9878 - 11152 (+)
Gene ID: k141_120961_7
Type: CAZyme
Location: 11162 - 11938 (+)
Gene ID: k141_120961_8
Type:
Location: 12074 - 12208 (+)
Gene ID: k141_120961_9
Type: STP
Location: 12201 - 13085 (-)
Gene ID: k141_120961_10
Type: TC
Location: 13331 - 14542 (-)
Gene ID: k141_120961_11
Type: CAZyme
Location: 14550 - 16325 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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