Cluster: CokerMO_2019_SRR8692231_bin.30_CGC3
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692231_bin.30
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_148 | 140505 | 141887 | - | 2.A.66.1.25 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_149 | 142201 | 142521 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_150 | 142514 | 143020 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_151 | 143494 | 144282 | - | 3.A.1.5.22 |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_152 | 144332 | 145327 | - | 3.A.1.5.20 |
| pfam | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_153 | 145343 | 146185 | - | RrnaAD | Ubie_methyltran | TehB | MTS | NodS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_154 | 146252 | 147868 | - | 3.A.1.5.20 |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_155 | 147915 | 148622 | - | 3.A.1.5.19 |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_156 | 148615 | 149541 | - | 3.A.1.5.41 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_157 | 149575 | 150132 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_158 | 150795 | 151406 | - | Resolvase |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_159 | 152519 | 153223 | + | 3.A.1.122.7 |
| TC | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_160 | 153263 | 156889 | + | 3.A.1.137.2 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_161 | 157191 | 157709 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | CokerMO_2019_SRR8692231_bin.30_k141_21153 | CokerMO_2019_SRR8692231_bin.30_k141_21153_162 | 157751 | 158998 | - | GH3 |
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_148
Type: TC
Location: 140505 - 141887 (-)
Type: TC
Location: 140505 - 141887 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_149
Type:
Location: 142201 - 142521 (+)
Type:
Location: 142201 - 142521 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_150
Type:
Location: 142514 - 143020 (+)
Type:
Location: 142514 - 143020 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_151
Type: TC
Location: 143494 - 144282 (-)
Type: TC
Location: 143494 - 144282 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_152
Type: TC
Location: 144332 - 145327 (-)
Type: TC
Location: 144332 - 145327 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_153
Type: pfam
Location: 145343 - 146185 (-)
Type: pfam
Location: 145343 - 146185 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_154
Type: TC
Location: 146252 - 147868 (-)
Type: TC
Location: 146252 - 147868 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_155
Type: TC
Location: 147915 - 148622 (-)
Type: TC
Location: 147915 - 148622 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_156
Type: TC
Location: 148615 - 149541 (-)
Type: TC
Location: 148615 - 149541 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_157
Type:
Location: 149575 - 150132 (-)
Type:
Location: 149575 - 150132 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_158
Type: pfam
Location: 150795 - 151406 (-)
Type: pfam
Location: 150795 - 151406 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_159
Type: TC
Location: 152519 - 153223 (+)
Type: TC
Location: 152519 - 153223 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_160
Type: TC
Location: 153263 - 156889 (+)
Type: TC
Location: 153263 - 156889 (+)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_161
Type:
Location: 157191 - 157709 (-)
Type:
Location: 157191 - 157709 (-)
Gene ID: CokerMO_2019_SRR8692231_bin.30_k141_21153_162
Type: CAZyme
Location: 157751 - 158998 (-)
Type: CAZyme
Location: 157751 - 158998 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1071
Species
UMGS1071 sp900548305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.