PROTEIN: CokerMO_2019_SRR8692231_bin.30_k141_21153_161
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692231_bin.30_k141_21153_161.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692231_bin.30_k141_21153_161
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Protein Sequence
MIILITGASH TGKTVLAQKL LEKYEYPYLS IDILKMGLIR SGYTNLTPED DSELELLLWP 60 IIREMIKTAV ENEQNLVIEG SYIPFAWKED FSDKYLNEIR YYCLVMSQHY IKRHFLEIKE 120 YANAIEQRID DTCCTVQSVL ADNAYYLEMC QKHSCPYILI DEEYPTHLEK LL 172
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132PAR0-F1-model_v4 | 1 | 172 | 1 | 162 | 0.6737 |
0.7455 |
| AF-A0A077Z2S3-F1-model_v4 | 1 | 172 | 19 | 178 | 0.662 |
0.7775 |
| AF-A0A0K0EN33-F1-model_v4 | 1 | 172 | 3 | 185 | 0.6466 |
0.7171 |
| AF-K7KBA4-F1-model_v4 | 1 | 172 | 18 | 188 | 0.6412 |
0.7306 |
| AF-O17622-F1-model_v4 | 1 | 172 | 3 | 185 | 0.635 |
0.7117 |
| AF-F1R4S7-F1-model_v4 | 1 | 172 | 7 | 211 | 0.6255 |
0.7407 |
| AF-Q58071-F1-model_v4 | 1 | 172 | 1 | 169 | 0.6247 |
0.6826 |
| AF-C0NWP3-F1-model_v4 | 1 | 172 | 42 | 253 | 0.5706 |
0.7181 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1ko4-assembly1.cif.gz_A | 1 | 172 | 7 | 160 | 0.6608 |
0.7503 |
| 4w5j-assembly4.cif.gz_D | 1 | 172 | 1 | 207 | 0.6458 |
0.7468 |
| 7e9v-assembly1.cif.gz_A | 1 | 172 | 3 | 188 | 0.64 |
0.7148 |
| 7owl-assembly1.cif.gz_B | 1 | 172 | 1 | 184 | 0.598 |
0.667 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A5VQY5-F1-model_v4 | 1 | 172 | 1 | 187 | 0.6637 |
0.7455 |
| AF-Q57CS9-F1-model_v4 | 1 | 172 | 1 | 187 | 0.6632 |
0.745 |
| AF-Q8YHL9-F1-model_v4 | 1 | 172 | 1 | 187 | 0.6632 |
0.7451 |
| AF-Q8G092-F1-model_v4 | 1 | 172 | 1 | 187 | 0.6632 |
0.7451 |
| AF-Q2YRT7-F1-model_v4 | 1 | 172 | 1 | 187 | 0.6632 |
0.745 |
| AF-C0RJI0-F1-model_v4 | 1 | 172 | 1 | 187 | 0.6624 |
0.7442 |
| AF-Q6G2Y6-F1-model_v4 | 1 | 172 | 1 | 188 | 0.6622 |
0.7413 |
| AF-A6X0D9-F1-model_v4 | 1 | 172 | 1 | 187 | 0.6622 |
0.744 |
| AF-A9M5M9-F1-model_v4 | 1 | 172 | 1 | 187 | 0.6619 |
0.7437 |
| AF-B8ELE2-F1-model_v4 | 1 | 172 | 1 | 191 | 0.6613 |
0.7417 |