Cluster: CokerMO_2019_SRR8692226_bin.19_CGC8
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CokerMO_2019_SRR8692226_bin.19
- CGC Family ID: CGCFAM_09258
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | CokerMO_2019_SRR8692226_bin.19_k141_14207 | CokerMO_2019_SRR8692226_bin.19_k141_14207_35 | 35798 | 37159 | + | 2.A.38.4.3 |
| pfam | CokerMO_2019_SRR8692226_bin.19_k141_14207 | CokerMO_2019_SRR8692226_bin.19_k141_14207_36 | 37195 | 38274 | + | DUF3048 | DUF3048_C |
| sulfatase | CokerMO_2019_SRR8692226_bin.19_k141_14207 | CokerMO_2019_SRR8692226_bin.19_k141_14207_37 | 38594 | 42538 | - | S1_32 |
| CAZyme | CokerMO_2019_SRR8692226_bin.19_k141_14207 | CokerMO_2019_SRR8692226_bin.19_k141_14207_38 | 42872 | 44227 | + | CE4 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692226_bin.19_k141_14207 | CokerMO_2019_SRR8692226_bin.19_k141_14207_39 | 44539 | 44796 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692226_bin.19_k141_14207 | CokerMO_2019_SRR8692226_bin.19_k141_14207_40 | 45000 | 45443 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692226_bin.19_k141_14207 | CokerMO_2019_SRR8692226_bin.19_k141_14207_41 | 45804 | 47345 | + | 2.A.21.2.3 |
| TC | CokerMO_2019_SRR8692226_bin.19_k141_14207 | CokerMO_2019_SRR8692226_bin.19_k141_14207_42 | 47410 | 49641 | - | 3.A.3.5.15 |
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_14207_35
Type: TC
Location: 35798 - 37159 (+)
Type: TC
Location: 35798 - 37159 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_14207_36
Type: pfam
Location: 37195 - 38274 (+)
Type: pfam
Location: 37195 - 38274 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_14207_37
Type: sulfatase
Location: 38594 - 42538 (-)
Type: sulfatase
Location: 38594 - 42538 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_14207_38
Type: CAZyme
Location: 42872 - 44227 (+)
Type: CAZyme
Location: 42872 - 44227 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_14207_39
Type:
Location: 44539 - 44796 (+)
Type:
Location: 44539 - 44796 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_14207_40
Type:
Location: 45000 - 45443 (-)
Type:
Location: 45000 - 45443 (-)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_14207_41
Type: TC
Location: 45804 - 47345 (+)
Type: TC
Location: 45804 - 47345 (+)
Gene ID: CokerMO_2019_SRR8692226_bin.19_k141_14207_42
Type: TC
Location: 47410 - 49641 (-)
Type: TC
Location: 47410 - 49641 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
JAGZMM01
Species
JAGZMM01 sp018364155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.