PROTEIN: CokerMO_2019_SRR8692226_bin.19_k141_14207_40
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692226_bin.19_k141_14207_40.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692226_bin.19_k141_14207_40
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Protein Sequence
MSKLQQKAGI LVCVTDQPSC ERLIKAGRQL ADLMGLPLQV LSVLPDRTSV QERGEVLEFL 60 YNAAAENGAS MTIYFHDDSA LMTAGHVRKY GVRHLVTGMP QDTGSGFVGV LHNLCPDIPV 120 TMVSTDGRLF TLAPSFEFAP HVSLSSK 147
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1G363-F1-model_v4 | 7 | 147 | 8 | 189 | 0.4894 |
0.7538 |
| AF-A0A0P0VMX2-F1-model_v4 | 1 | 141 | 34 | 212 | 0.4799 |
0.8063 |
| AF-A0A1P8BD07-F1-model_v4 | 1 | 138 | 10 | 169 | 0.4531 |
0.814 |
| AF-Q9SW11-F1-model_v4 | 4 | 139 | 16 | 184 | 0.4261 |
0.7971 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P73870-F1-model_v4 | 1 | 126 | 171 | 370 | 0.5315 |
0.892 |
| AF-Q9SW11-F1-model_v4 | 4 | 139 | 16 | 184 | 0.4261 |
0.7971 |