Cluster: CokerMO_2019_SRR8692215_bin.31_CGC15
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CokerMO_2019_SRR8692215_bin.31
- CGC Family ID: CGCFAM_00112
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_332 | 359125 | 360834 | - | GH3 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_333 | 361070 | 363337 | - | GH3 |
| CAZyme | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_334 | 363566 | 366379 | - | GH105 |
| NULL(UNKNOWN) | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_335 | 366434 | 368341 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_336 | 368467 | 370158 | - | 3.A.1.1.9 |
| TF | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_337 | 370340 | 372529 | - | HTH_AraC | HTH_AraC |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_338 | 372625 | 373500 | - | 3.A.1.1.10 |
| TC | CokerMO_2019_SRR8692215_bin.31_k141_11688 | CokerMO_2019_SRR8692215_bin.31_k141_11688_339 | 373518 | 374465 | - | 3.A.1.1.10 |
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_332
Type: CAZyme
Location: 359125 - 360834 (-)
Type: CAZyme
Location: 359125 - 360834 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_333
Type: CAZyme
Location: 361070 - 363337 (-)
Type: CAZyme
Location: 361070 - 363337 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_334
Type: CAZyme
Location: 363566 - 366379 (-)
Type: CAZyme
Location: 363566 - 366379 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_335
Type:
Location: 366434 - 368341 (-)
Type:
Location: 366434 - 368341 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_336
Type: TC
Location: 368467 - 370158 (-)
Type: TC
Location: 368467 - 370158 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_337
Type: TF
Location: 370340 - 372529 (-)
Type: TF
Location: 370340 - 372529 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_338
Type: TC
Location: 372625 - 373500 (-)
Type: TC
Location: 372625 - 373500 (-)
Gene ID: CokerMO_2019_SRR8692215_bin.31_k141_11688_339
Type: TC
Location: 373518 - 374465 (-)
Type: TC
Location: 373518 - 374465 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Fimimorpha
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.