PROTEIN: CokerMO_2019_SRR8692215_bin.31_k141_11688_335
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Protein File & Metadata
Source:
CokerMO_2019_SRR8692215_bin.31_k141_11688_335.pdb
Genome ID:
Protein ID:
CokerMO_2019_SRR8692215_bin.31_k141_11688_335
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Protein Sequence
MTAFYRMEEQ KTENQNMFEK YTEEVSKQFG TEEYCKTMDN IHVRMFEKLN QCIPFFASGR 60 EDARIEANRL IRNQEMTFCQ FMPLLCMETL LRFRDKMDSD NMEKYENYVK NILDEFIHTD 120 LDFVGVNDNF PCIATYIVLM GGIMFDRSDV YAVGIKRLEQ LAEMFQRRGC QSEFNSQSYI 180 AGQINAIALI AERMEDPHVK ELALKCEERL WVDFLGHVMP NLCCSAGPRS RSYLSSYVGG 240 VNAIKLLYQL FGEQAQVKPK TPYYSDLLLC PLHCPTWLAE WYLNRTYPYE FHATFEVNSS 300 NDGLPNGKRR GHQDGKPDPG TRDPYQEEDL YEYPSCAGSI HTYMEQEYSL GTATREFHNG 360 QQTDSFLISY PKKKKPQSEE DAGWVFTRYV MNDKVPGQPN SYPEYGVNDS GFNPWDMGRK 420 TCIQKKNSAM VLYKPKAYAC KNVKSMRLCL IFPAKVNDPV KEIYVGDEKV ENYTGSYQNT 480 ESVFVSDGEI YMAFHPMILT NYGRKHAVTV EKTNDMVMVS FYNYEGEERD FTARGFLHTG 540 NGFVCEVRKA DAFADFEEFR KKTKKFVISD RFETNPHVRQ TYQRISSYET DWVNLKCEYS 600 PASEGIRYQM VDGKLLEEPK LSATGLCTEK LPFME 635
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517ZPE3-F1-model_v4 | CBM67 | 3 | 635 | 50 | 811 | 0.6277 |
0.7201 |
| AF-C9XXN5-F1-model_v4 | PL8 | 7 | 618 | 16 | 712 | 0.5737 |
0.6628 |
| AF-A0A0X8JSH9-F1-model_v4 | PL0 | 14 | 555 | 1 | 494 | 0.5556 |
0.6378 |
| AF-A0A077XPU9-F1-model_v4 | PL0 | 10 | 551 | 48 | 521 | 0.5436 |
0.6625 |
| AF-A0A6G6X9P2-F1-model_v4 | PL0 | 7 | 552 | 45 | 547 | 0.5409 |
0.6395 |
| AF-A0A2K8Z6P1-F1-model_v4 | PL0 | 10 | 554 | 46 | 537 | 0.5405 |
0.6472 |
| AF-A0A1U9NK86-F1-model_v4 | PL0 | 8 | 551 | 52 | 559 | 0.5397 |
0.6385 |
| AF-A0A5P6NFN7-F1-model_v4 | PL0 | 7 | 555 | 49 | 552 | 0.5397 |
0.6398 |
| AF-A0A2D1U8L6-F1-model_v4 | PL0 | 10 | 551 | 52 | 527 | 0.5379 |
0.6566 |
| QYG92357.1 | PL0 | 62 | 551 | 1 | 442 | 0.5363 |
0.6419 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517ZPE3 | CBM67 | 3 | 635 | 50 | 811 | 0.6277 |
0.7201 |
| A0A517ST81 | CE12 | 1 | 635 | 242 | 864 | 0.603 |
0.7139 |
| C9XXN5 | PL8 | 7 | 618 | 16 | 712 | 0.5737 |
0.6628 |
| A0A7D8A734 | PL8 | 6 | 620 | 54 | 770 | 0.5457 |
0.639 |
| WHI49178.1 | CBM92 | 81 | 605 | 1 | 530 | 0.5046 |
0.7264 |
| F4LPB5 | CBM70 , PL8 | 7 | 618 | 455 | 1162 | 0.4726 |
0.6429 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.