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Cluster: CokerMO_2019_SRR8692180_bin.26_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC CokerMO_2019_SRR8692180_bin.26_k141_43709 CokerMO_2019_SRR8692180_bin.26_k141_43709_22 31276 32712 + 4.A.1.2.7
CAZyme CokerMO_2019_SRR8692180_bin.26_k141_43709 CokerMO_2019_SRR8692180_bin.26_k141_43709_23 32969 34039 + GH170
TF CokerMO_2019_SRR8692180_bin.26_k141_43709 CokerMO_2019_SRR8692180_bin.26_k141_43709_24 34011 35081 - HTH_AraC
pfam CokerMO_2019_SRR8692180_bin.26_k141_43709 CokerMO_2019_SRR8692180_bin.26_k141_43709_25 35153 35941 + CbiQ
TC CokerMO_2019_SRR8692180_bin.26_k141_43709 CokerMO_2019_SRR8692180_bin.26_k141_43709_26 35938 37593 + 3.A.1.31.1
Gene ID: CokerMO_2019_SRR8692180_bin.26_k141_43709_22
Type: TC
Location: 31276 - 32712 (+)
Gene ID: CokerMO_2019_SRR8692180_bin.26_k141_43709_23
Type: CAZyme
Location: 32969 - 34039 (+)
Gene ID: CokerMO_2019_SRR8692180_bin.26_k141_43709_24
Type: TF
Location: 34011 - 35081 (-)
Gene ID: CokerMO_2019_SRR8692180_bin.26_k141_43709_25
Type: pfam
Location: 35153 - 35941 (+)
Gene ID: CokerMO_2019_SRR8692180_bin.26_k141_43709_26
Type: TC
Location: 35938 - 37593 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
CokerMO_2019_SRR8692180_bin.26_k141_43709_22 vegan > omnivore 1.72083 0.00286

🧭 Explore Read Mapping of CGC

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