Cluster: ChuDM_2017_SRR8942418_bin.17_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: ChuDM_2017_SRR8942418_bin.17
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ChuDM_2017_SRR8942418_bin.17_k119_2407 | ChuDM_2017_SRR8942418_bin.17_k119_2407_78 | 85385 | 87895 | + | GT2 |
| TC | ChuDM_2017_SRR8942418_bin.17_k119_2407 | ChuDM_2017_SRR8942418_bin.17_k119_2407_79 | 87915 | 90134 | + | 4.D.3.1.6 |
| CAZyme | ChuDM_2017_SRR8942418_bin.17_k119_2407 | ChuDM_2017_SRR8942418_bin.17_k119_2407_80 | 90131 | 91210 | + | GH8 |
Gene ID: ChuDM_2017_SRR8942418_bin.17_k119_2407_78
Type: CAZyme
Location: 85385 - 87895 (+)
Type: CAZyme
Location: 85385 - 87895 (+)
Gene ID: ChuDM_2017_SRR8942418_bin.17_k119_2407_79
Type: TC
Location: 87915 - 90134 (+)
Type: TC
Location: 87915 - 90134 (+)
Gene ID: ChuDM_2017_SRR8942418_bin.17_k119_2407_80
Type: CAZyme
Location: 90131 - 91210 (+)
Type: CAZyme
Location: 90131 - 91210 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Aphodousia
Species
Aphodousia faecalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.