Cluster: ChuDM_2017_SRR8942396_bin.6_CGC29
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: ChuDM_2017_SRR8942396_bin.6
- CGC Family ID: CGCFAM_01496
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_387 | 408265 | 410199 | + | 1.B.14.6.1 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_388 | 410217 | 412676 | + | Metallophos | PQQ | PQQ | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | MetallophosN |
| sulfatase | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_389 | 412819 | 414339 | - | S1_16 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_390 | 414486 | 415886 | - | GH109 |
| TF | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_391 | 416209 | 420162 | + | HTH_AraC |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_392 | 420506 | 422377 | - | GH110 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_393 | 422559 | 424145 | - | GH20 |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_394 | 424183 | 426042 | - | GH110 |
| NULL(UNKNOWN) | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_395 | 426047 | 428869 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_396 | 429052 | 431193 | - | Fib_succ_major | SusE |
| CAZyme | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_397 | 431206 | 432921 | - | GH136 |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_398 | 432946 | 434061 | - | Fib_succ_major |
| pfam | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_399 | 434113 | 435717 | - | SusD_RagB | SusD-like_3 |
| TC | ChuDM_2017_SRR8942396_bin.6_k119_17236 | ChuDM_2017_SRR8942396_bin.6_k119_17236_400 | 435721 | 438807 | - | 1.B.14.6.1 |
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_387
Type: TC
Location: 408265 - 410199 (+)
Type: TC
Location: 408265 - 410199 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_388
Type: pfam
Location: 410217 - 412676 (+)
Type: pfam
Location: 410217 - 412676 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_389
Type: sulfatase
Location: 412819 - 414339 (-)
Type: sulfatase
Location: 412819 - 414339 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_390
Type: CAZyme
Location: 414486 - 415886 (-)
Type: CAZyme
Location: 414486 - 415886 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_391
Type: TF
Location: 416209 - 420162 (+)
Type: TF
Location: 416209 - 420162 (+)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_392
Type: CAZyme
Location: 420506 - 422377 (-)
Type: CAZyme
Location: 420506 - 422377 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_393
Type: CAZyme
Location: 422559 - 424145 (-)
Type: CAZyme
Location: 422559 - 424145 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_394
Type: CAZyme
Location: 424183 - 426042 (-)
Type: CAZyme
Location: 424183 - 426042 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_395
Type:
Location: 426047 - 428869 (-)
Type:
Location: 426047 - 428869 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_396
Type: pfam
Location: 429052 - 431193 (-)
Type: pfam
Location: 429052 - 431193 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_397
Type: CAZyme
Location: 431206 - 432921 (-)
Type: CAZyme
Location: 431206 - 432921 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_398
Type: pfam
Location: 432946 - 434061 (-)
Type: pfam
Location: 432946 - 434061 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_399
Type: pfam
Location: 434113 - 435717 (-)
Type: pfam
Location: 434113 - 435717 (-)
Gene ID: ChuDM_2017_SRR8942396_bin.6_k119_17236_400
Type: TC
Location: 435721 - 438807 (-)
Type: TC
Location: 435721 - 438807 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Dysgonomonadaceae
Genus
Dysgonomonas
Species
Dysgonomonas sp003523545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.