PROTEIN: ChuDM_2017_SRR8942396_bin.6_k119_17236_395
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Protein File & Metadata
Source:
ChuDM_2017_SRR8942396_bin.6_k119_17236_395.pdb
Genome ID:
Protein ID:
ChuDM_2017_SRR8942396_bin.6_k119_17236_395
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Protein Sequence
MKRNIFILFL LFCTTITAQT VKEGVNQDPF ETKAGEVPYE MKDRKDEFTP DLTFNDCTQW 60 IIQSHNVEAD LYRTKQERVL SEYSGKIVYK TLGDNAEFRL LLKKPLLMKE WDCVEFWNYG 120 DHWCWESNAS TAMQVYIIIY DADGGEHLLP AVQAGYGGLV HKYWFLSHSK LHEKINGPAK 180 FAGYAFRNEK PDIGVTHTIY MGNTYFIKEK LEPFAYKEFP KKLPFPLRAE TIAPLCKSES 240 GKNKLESKGN KYIFSYSDAG KMLTYEVDPS EPFNEIILNN SIVLNNGASI VFENNTPVNW 300 KQISKKINGD TLKVRFKAEG TAISQDFDCT YYIHNKSLVW TIEEKSESGR VAEINLGTTH 360 AGTDAQLIPI PFLVYNYSRV RPNILYSDGL FFFTMFDWYY TNASEYFAGT NSIENGKASY 420 NGGSRYIPIL NGKRNPVKER LFFNVSDDVQ EVLPTIDNPA SPMRDLQADR FWCIAQGDDL 480 EVLGRYVSAL RSKGVEKVSI RYHEDFWRKD GGSFTFRLDP SPNLSVQSLQ DYVRFVKSKD 540 WRIGFYSNYT DISPVNKYWN RDWIKMGPKG EWEVSWSRTY SPKPHVAWEQ QAYFAPRIQK 600 MFGTNHSYCD VHTAISPMSR VDYDYRSPGA GMFRSVIQYY GMLLMNERRS YLGPVYSEGG 660 NHFWYAGLLE GNYANGDLKN LPVFPDFQLL KINPLEMDAS NTGQGYEYLS YALAYGHIGM 720 LCSSIPESIK RYAMLQPLQD SYSMVKIKDI SYSDGNSFYN TSEAIKRKLL DKARIRLVYE 780 SGLTVYVNFA ETDWKLNAEN LTLPRFGFYA VSSDGRIKSF SAIDSNSGTR IDKVYSPEIF 840 YLDTQDKQVN GDLGGKGTYI LKKEKFSWEA IPVENTGKIE FDLALLGMEN YGIDIQALDE 900 NGNSLGTING EPVRGRVSIT PQPGHYKYNI IPVINYNLNQ 940
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1I2KCF8 | GH129 | 248 | 813 | 2 | 619 | 0.6252 |
0.8247 |
| AF-D9R6V4-F1-model_v4 | GH129 | 249 | 814 | 1 | 630 | 0.618 |
0.8231 |
| AF-A0A3G3JZD3-F1-model_v4 | CBM32 | 240 | 926 | 35 | 879 | 0.5912 |
0.7934 |
| AF-A0A3G9JNJ6-F1-model_v4 | GH0 | 251 | 837 | 1 | 737 | 0.5686 |
0.7949 |
| UVI27306.1 | GH0 | 45 | 816 | 25 | 754 | 0.5662 |
0.6541 |
| AF-A0A2S1LIW0-F1-model_v4 | GH129 | 248 | 875 | 19 | 675 | 0.5644 |
0.708 |
| AF-F0RBZ2-F1-model_v4 | GH129 | 248 | 875 | 23 | 685 | 0.5635 |
0.7116 |
| UMB61729.1 | GH129 | 247 | 875 | 39 | 696 | 0.5607 |
0.7129 |
| AF-G0L004-F1-model_v4 | GH129 | 248 | 875 | 33 | 693 | 0.5589 |
0.7105 |
| AF-A0A1B1FTK1-F1-model_v4 | GH129 | 248 | 875 | 32 | 689 | 0.5577 |
0.7066 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1I2KCF8 | GH129 | 248 | 813 | 2 | 619 | 0.6252 |
0.8247 |
| A0A8J8M7Q1 | GH129 | 247 | 813 | 3 | 629 | 0.6211 |
0.8251 |
| A0A2S0KZ08 | GH129 | 235 | 833 | 16 | 672 | 0.6202 |
0.8105 |
| A0A1C5Z7I5 | GH129 | 250 | 863 | 1 | 632 | 0.6183 |
0.7645 |
| A0A133YGE2 | GH129 | 250 | 853 | 1 | 664 | 0.6163 |
0.7946 |
| A0A3E3K0M9 | GH129 | 250 | 811 | 1 | 622 | 0.6162 |
0.8204 |
| A0A0L7C8H1 | GH129 | 250 | 813 | 1 | 627 | 0.6134 |
0.8173 |
| A0A3G3JZD3 | CBM32 | 240 | 926 | 35 | 879 | 0.5912 |
0.7934 |
| BCM92632.1 | GH36 | 240 | 835 | 2 | 665 | 0.5798 |
0.7592 |
| WFR57918.1 | GH36 | 240 | 835 | 4 | 665 | 0.577 |
0.7548 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5wzq-assembly2.cif.gz_B | 249 | 813 | 1 | 611 | 0.6249 |
0.8197 |
| 5wzp-assembly1.cif.gz_A | 249 | 810 | 1 | 603 | 0.624 |
0.8166 |
| 5wzp-assembly2.cif.gz_B | 249 | 812 | 1 | 602 | 0.6231 |
0.812 |
| 5wzq-assembly1.cif.gz_A | 249 | 813 | 1 | 610 | 0.6221 |
0.8152 |
| 5wzn-assembly1.cif.gz_A | 249 | 814 | 1 | 621 | 0.6193 |
0.8183 |
| 5wzn-assembly2.cif.gz_B | 249 | 812 | 1 | 619 | 0.6169 |
0.8164 |
| 5wzr-assembly1.cif.gz_A | 249 | 814 | 1 | 630 | 0.6145 |
0.8183 |
| 5wzr-assembly2.cif.gz_B | 249 | 812 | 1 | 630 | 0.6135 |
0.8196 |
| 5opq-assembly2.cif.gz_D | 251 | 847 | 1 | 656 | 0.5693 |
0.7377 |
| 5a5a-assembly1.cif.gz_A | 247 | 928 | 11 | 776 | 0.4343 |
0.6234 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0DTR5-F1-model_v4 | 242 | 830 | 34 | 755 | 0.4653 |
0.7672 |