Cluster: ChuDM_2017_SRR8942361_bin.4_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ChuDM_2017_SRR8942361_bin.4
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ChuDM_2017_SRR8942361_bin.4_k119_3556 | ChuDM_2017_SRR8942361_bin.4_k119_3556_10 | 13069 | 13773 | + | 9.B.10.1.1 |
| pfam | ChuDM_2017_SRR8942361_bin.4_k119_3556 | ChuDM_2017_SRR8942361_bin.4_k119_3556_11 | 13899 | 14810 | + | F_bP_aldolase |
| pfam | ChuDM_2017_SRR8942361_bin.4_k119_3556 | ChuDM_2017_SRR8942361_bin.4_k119_3556_12 | 14905 | 15753 | - | PseudoU_synth_2 |
| CAZyme | ChuDM_2017_SRR8942361_bin.4_k119_3556 | ChuDM_2017_SRR8942361_bin.4_k119_3556_13 | 15894 | 17981 | + | GT51 |
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3556_10
Type: TC
Location: 13069 - 13773 (+)
Type: TC
Location: 13069 - 13773 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3556_11
Type: pfam
Location: 13899 - 14810 (+)
Type: pfam
Location: 13899 - 14810 (+)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3556_12
Type: pfam
Location: 14905 - 15753 (-)
Type: pfam
Location: 14905 - 15753 (-)
Gene ID: ChuDM_2017_SRR8942361_bin.4_k119_3556_13
Type: CAZyme
Location: 15894 - 17981 (+)
Type: CAZyme
Location: 15894 - 17981 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus delbrueckii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.