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Cluster: CGMR100343_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_60565 k141_60565_14 10409 11803 + GH23
TC k141_60565 k141_60565_15 11800 12738 - 9.B.156.1.5
pfam k141_60565 k141_60565_16 12880 13317 - PepSY_like | PepSY_like
pfam k141_60565 k141_60565_17 13330 13800 - DUF4890
CAZyme k141_60565 k141_60565_18 13897 15234 - GH57
CAZyme k141_60565 k141_60565_19 15247 16500 - GT4
CAZyme k141_60565 k141_60565_20 16523 18475 - GH133
TC k141_60565 k141_60565_21 18631 19218 - 2.A.95.1.4
TF k141_60565 k141_60565_22 19346 20008 + 0038753
peptidase k141_60565 k141_60565_23 20164 21687 - C26.957
TC k141_60565 k141_60565_24 21739 22176 - 1.A.22.1.1
Gene ID: k141_60565_14
Type: CAZyme
Location: 10409 - 11803 (+)
Gene ID: k141_60565_15
Type: TC
Location: 11800 - 12738 (-)
Gene ID: k141_60565_16
Type: pfam
Location: 12880 - 13317 (-)
Gene ID: k141_60565_17
Type: pfam
Location: 13330 - 13800 (-)
Gene ID: k141_60565_18
Type: CAZyme
Location: 13897 - 15234 (-)
Gene ID: k141_60565_19
Type: CAZyme
Location: 15247 - 16500 (-)
Gene ID: k141_60565_20
Type: CAZyme
Location: 16523 - 18475 (-)
Gene ID: k141_60565_21
Type: TC
Location: 18631 - 19218 (-)
Gene ID: k141_60565_22
Type: TF
Location: 19346 - 20008 (+)
Gene ID: k141_60565_23
Type: peptidase
Location: 20164 - 21687 (-)
Gene ID: k141_60565_24
Type: TC
Location: 21739 - 22176 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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