Cluster: CGMR099484_CGC34
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR099484
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_57036 | k141_57036_9 | 8594 | 10480 | - | GH35 |
| pfam | k141_57036 | k141_57036_10 | 10881 | 12890 | + | TonB_dep_Rec_b-barrel | Plug |
| pfam | k141_57036 | k141_57036_11 | 12907 | 13995 | + | DUF5074 |
| TC | k141_57036 | k141_57036_12 | 14006 | 15142 | + | 3.A.1.13.2 |
| TC | k141_57036 | k141_57036_13 | 15193 | 16224 | + | 3.A.1.13.2 |
| TC | k141_57036 | k141_57036_14 | 16224 | 17231 | + | 3.A.1.13.2 |
| TC | k141_57036 | k141_57036_15 | 17529 | 19910 | + | 1.B.14.6.5 |
| pfam | k141_57036 | k141_57036_16 | 20023 | 20835 | - | YjbH |
| pfam | k141_57036 | k141_57036_17 | 20832 | 21845 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | k141_57036 | k141_57036_18 | 21847 | 22932 | - | GT4 |
| CAZyme | k141_57036 | k141_57036_19 | 22951 | 23949 | - | GT2 |
| pfam | k141_57036 | k141_57036_20 | 24002 | 25060 | - | EpsG |
| CAZyme | k141_57036 | k141_57036_21 | 25057 | 26040 | - | GT2 |
| pfam | k141_57036 | k141_57036_22 | 26045 | 26887 | - | Glycos_transf_2 |
| CAZyme | k141_57036 | k141_57036_23 | 26917 | 27909 | - | GT2 |
| TC | k141_57036 | k141_57036_24 | 27926 | 29296 | - | 2.A.66.10.1 |
Gene ID: k141_57036_9
Type: CAZyme
Location: 8594 - 10480 (-)
Type: CAZyme
Location: 8594 - 10480 (-)
Gene ID: k141_57036_10
Type: pfam
Location: 10881 - 12890 (+)
Type: pfam
Location: 10881 - 12890 (+)
Gene ID: k141_57036_11
Type: pfam
Location: 12907 - 13995 (+)
Type: pfam
Location: 12907 - 13995 (+)
Gene ID: k141_57036_12
Type: TC
Location: 14006 - 15142 (+)
Type: TC
Location: 14006 - 15142 (+)
Gene ID: k141_57036_13
Type: TC
Location: 15193 - 16224 (+)
Type: TC
Location: 15193 - 16224 (+)
Gene ID: k141_57036_14
Type: TC
Location: 16224 - 17231 (+)
Type: TC
Location: 16224 - 17231 (+)
Gene ID: k141_57036_15
Type: TC
Location: 17529 - 19910 (+)
Type: TC
Location: 17529 - 19910 (+)
Gene ID: k141_57036_16
Type: pfam
Location: 20023 - 20835 (-)
Type: pfam
Location: 20023 - 20835 (-)
Gene ID: k141_57036_17
Type: pfam
Location: 20832 - 21845 (-)
Type: pfam
Location: 20832 - 21845 (-)
Gene ID: k141_57036_18
Type: CAZyme
Location: 21847 - 22932 (-)
Type: CAZyme
Location: 21847 - 22932 (-)
Gene ID: k141_57036_19
Type: CAZyme
Location: 22951 - 23949 (-)
Type: CAZyme
Location: 22951 - 23949 (-)
Gene ID: k141_57036_20
Type: pfam
Location: 24002 - 25060 (-)
Type: pfam
Location: 24002 - 25060 (-)
Gene ID: k141_57036_21
Type: CAZyme
Location: 25057 - 26040 (-)
Type: CAZyme
Location: 25057 - 26040 (-)
Gene ID: k141_57036_22
Type: pfam
Location: 26045 - 26887 (-)
Type: pfam
Location: 26045 - 26887 (-)
Gene ID: k141_57036_23
Type: CAZyme
Location: 26917 - 27909 (-)
Type: CAZyme
Location: 26917 - 27909 (-)
Gene ID: k141_57036_24
Type: TC
Location: 27926 - 29296 (-)
Type: TC
Location: 27926 - 29296 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sartorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.