Cluster: CGMR099484_CGC33
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR099484
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_162721 | k141_162721_17 | 20640 | 23957 | + | 1.B.14.6.13 |
| TC | k141_162721 | k141_162721_18 | 23988 | 25616 | + | 8.A.46.2.2 |
| CAZyme | k141_162721 | k141_162721_19 | 25903 | 27651 | + | GH123 |
| pfam | k141_162721 | k141_162721_20 | 27757 | 28731 | - | Formyl_trans_N | Formyl_trans_C |
| TC | k141_162721 | k141_162721_21 | 28745 | 30547 | - | 2.A.49.6.1 |
| pfam | k141_162721 | k141_162721_22 | 30556 | 31131 | - | Sua5_yciO_yrdC |
| CAZyme | k141_162721 | k141_162721_23 | 31368 | 33035 | - | CBM91 | GH43_10 |
| TC | k141_162721 | k141_162721_24 | 33035 | 34735 | - | 8.A.46.1.6 |
| TC | k141_162721 | k141_162721_25 | 34766 | 37729 | - | 1.B.14.6.1 |
| CAZyme | k141_162721 | k141_162721_26 | 37784 | 40168 | - | GH95 |
| TF | k141_162721 | k141_162721_27 | 40374 | 44696 | - | HTH_AraC |
| CAZyme | k141_162721 | k141_162721_28 | 44832 | 45995 | - | CE9 |
| TC | k141_162721 | k141_162721_29 | 46085 | 49294 | - | 2.A.6.3.6 |
| pfam | k141_162721 | k141_162721_30 | 49291 | 50781 | - | OEP | OEP |
| TC | k141_162721 | k141_162721_31 | 50768 | 53848 | - | 2.A.6.3.6 |
Gene ID: k141_162721_17
Type: TC
Location: 20640 - 23957 (+)
Type: TC
Location: 20640 - 23957 (+)
Gene ID: k141_162721_18
Type: TC
Location: 23988 - 25616 (+)
Type: TC
Location: 23988 - 25616 (+)
Gene ID: k141_162721_19
Type: CAZyme
Location: 25903 - 27651 (+)
Type: CAZyme
Location: 25903 - 27651 (+)
Gene ID: k141_162721_20
Type: pfam
Location: 27757 - 28731 (-)
Type: pfam
Location: 27757 - 28731 (-)
Gene ID: k141_162721_21
Type: TC
Location: 28745 - 30547 (-)
Type: TC
Location: 28745 - 30547 (-)
Gene ID: k141_162721_22
Type: pfam
Location: 30556 - 31131 (-)
Type: pfam
Location: 30556 - 31131 (-)
Gene ID: k141_162721_23
Type: CAZyme
Location: 31368 - 33035 (-)
Type: CAZyme
Location: 31368 - 33035 (-)
Gene ID: k141_162721_24
Type: TC
Location: 33035 - 34735 (-)
Type: TC
Location: 33035 - 34735 (-)
Gene ID: k141_162721_25
Type: TC
Location: 34766 - 37729 (-)
Type: TC
Location: 34766 - 37729 (-)
Gene ID: k141_162721_26
Type: CAZyme
Location: 37784 - 40168 (-)
Type: CAZyme
Location: 37784 - 40168 (-)
Gene ID: k141_162721_27
Type: TF
Location: 40374 - 44696 (-)
Type: TF
Location: 40374 - 44696 (-)
Gene ID: k141_162721_28
Type: CAZyme
Location: 44832 - 45995 (-)
Type: CAZyme
Location: 44832 - 45995 (-)
Gene ID: k141_162721_29
Type: TC
Location: 46085 - 49294 (-)
Type: TC
Location: 46085 - 49294 (-)
Gene ID: k141_162721_30
Type: pfam
Location: 49291 - 50781 (-)
Type: pfam
Location: 49291 - 50781 (-)
Gene ID: k141_162721_31
Type: TC
Location: 50768 - 53848 (-)
Type: TC
Location: 50768 - 53848 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sartorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.