Cluster: CGMR099484_CGC21
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 11
- Substrate:
- Genome ID: CGMR099484
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2373 | k141_2373_1 | 1 | 1833 | - | GH2 |
| CAZyme | k141_2373 | k141_2373_2 | 1860 | 4394 | - | GH115 |
| CAZyme | k141_2373 | k141_2373_3 | 4418 | 7765 | - | GH106 |
| NULL(UNKNOWN) | k141_2373 | k141_2373_4 | 7840 | 7947 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_2373 | k141_2373_5 | 8031 | 9260 | - | GH154 |
| CAZyme | k141_2373 | k141_2373_6 | 9250 | 10440 | - | GH88 |
| CAZyme | k141_2373 | k141_2373_7 | 10496 | 13474 | - | GH2 |
| TF | k141_2373 | k141_2373_8 | 13596 | 16382 | - | HTH_AraC |
| CAZyme | k141_2373 | k141_2373_9 | 16514 | 18295 | - | GH78 |
| CAZyme | k141_2373 | k141_2373_10 | 18299 | 19921 | - | GH27 |
| CAZyme | k141_2373 | k141_2373_11 | 19943 | 22159 | - | GH78 |
| CAZyme | k141_2373 | k141_2373_12 | 22262 | 23509 | - | CE12 |
| CAZyme | k141_2373 | k141_2373_13 | 23518 | 25995 | - | GH2 |
| pfam | k141_2373 | k141_2373_14 | 26209 | 28260 | - | SusD_RagB | SusD-like_3 |
| TC | k141_2373 | k141_2373_15 | 28274 | 31822 | - | 1.B.14.6.1 |
Gene ID: k141_2373_1
Type: CAZyme
Location: 1 - 1833 (-)
Type: CAZyme
Location: 1 - 1833 (-)
Gene ID: k141_2373_2
Type: CAZyme
Location: 1860 - 4394 (-)
Type: CAZyme
Location: 1860 - 4394 (-)
Gene ID: k141_2373_3
Type: CAZyme
Location: 4418 - 7765 (-)
Type: CAZyme
Location: 4418 - 7765 (-)
Gene ID: k141_2373_4
Type:
Location: 7840 - 7947 (-)
Type:
Location: 7840 - 7947 (-)
Gene ID: k141_2373_5
Type: CAZyme
Location: 8031 - 9260 (-)
Type: CAZyme
Location: 8031 - 9260 (-)
Gene ID: k141_2373_6
Type: CAZyme
Location: 9250 - 10440 (-)
Type: CAZyme
Location: 9250 - 10440 (-)
Gene ID: k141_2373_7
Type: CAZyme
Location: 10496 - 13474 (-)
Type: CAZyme
Location: 10496 - 13474 (-)
Gene ID: k141_2373_8
Type: TF
Location: 13596 - 16382 (-)
Type: TF
Location: 13596 - 16382 (-)
Gene ID: k141_2373_9
Type: CAZyme
Location: 16514 - 18295 (-)
Type: CAZyme
Location: 16514 - 18295 (-)
Gene ID: k141_2373_10
Type: CAZyme
Location: 18299 - 19921 (-)
Type: CAZyme
Location: 18299 - 19921 (-)
Gene ID: k141_2373_11
Type: CAZyme
Location: 19943 - 22159 (-)
Type: CAZyme
Location: 19943 - 22159 (-)
Gene ID: k141_2373_12
Type: CAZyme
Location: 22262 - 23509 (-)
Type: CAZyme
Location: 22262 - 23509 (-)
Gene ID: k141_2373_13
Type: CAZyme
Location: 23518 - 25995 (-)
Type: CAZyme
Location: 23518 - 25995 (-)
Gene ID: k141_2373_14
Type: pfam
Location: 26209 - 28260 (-)
Type: pfam
Location: 26209 - 28260 (-)
Gene ID: k141_2373_15
Type: TC
Location: 28274 - 31822 (-)
Type: TC
Location: 28274 - 31822 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sartorii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_2373_1 | vegan > omnivore | 1.18801 | 0.04214 |