Cluster: CGMR098611_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR098611
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_38072 | k141_38072_1 | 1 | 795 | + | 2.A.7.5.4 |
| pfam | k141_38072 | k141_38072_2 | 1016 | 2368 | + | PGI |
| NULL(UNKNOWN) | k141_38072 | k141_38072_3 | 2627 | 2818 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_38072 | k141_38072_4 | 3195 | 5189 | + | 3.A.1.122.13 |
| CAZyme | k141_38072 | k141_38072_5 | 5211 | 6770 | + | GT4 |
| TC | k141_38072 | k141_38072_6 | 6760 | 8526 | + | 3.A.1.117.3 |
Gene ID: k141_38072_1
Type: TC
Location: 1 - 795 (+)
Type: TC
Location: 1 - 795 (+)
Gene ID: k141_38072_2
Type: pfam
Location: 1016 - 2368 (+)
Type: pfam
Location: 1016 - 2368 (+)
Gene ID: k141_38072_3
Type:
Location: 2627 - 2818 (+)
Type:
Location: 2627 - 2818 (+)
Gene ID: k141_38072_4
Type: TC
Location: 3195 - 5189 (+)
Type: TC
Location: 3195 - 5189 (+)
Gene ID: k141_38072_5
Type: CAZyme
Location: 5211 - 6770 (+)
Type: CAZyme
Location: 5211 - 6770 (+)
Gene ID: k141_38072_6
Type: TC
Location: 6760 - 8526 (+)
Type: TC
Location: 6760 - 8526 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.