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Cluster: CGMR098611_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_8038 k141_8038_1 261 1400 + 3.A.1.1.20
TF k141_8038 k141_8038_2 1750 3228 + HTH_AraC | HTH_AraC
CAZyme k141_8038 k141_8038_3 4029 6164 - GH92
TF k141_8038 k141_8038_4 6168 7232 - GntR
CAZyme k141_8038 k141_8038_5 7382 8671 + GH125
CAZyme k141_8038 k141_8038_6 8682 11393 + GH38
pfam k141_8038 k141_8038_7 11395 12276 + ROK
CAZyme k141_8038 k141_8038_8 12290 13678 + GH1
CAZyme k141_8038 k141_8038_9 13713 14984 + GH125
TC k141_8038 k141_8038_10 15198 16373 - 2.A.1.2.25
Gene ID: k141_8038_1
Type: TC
Location: 261 - 1400 (+)
Gene ID: k141_8038_2
Type: TF
Location: 1750 - 3228 (+)
Gene ID: k141_8038_3
Type: CAZyme
Location: 4029 - 6164 (-)
Gene ID: k141_8038_4
Type: TF
Location: 6168 - 7232 (-)
Gene ID: k141_8038_5
Type: CAZyme
Location: 7382 - 8671 (+)
Gene ID: k141_8038_6
Type: CAZyme
Location: 8682 - 11393 (+)
Gene ID: k141_8038_7
Type: pfam
Location: 11395 - 12276 (+)
Gene ID: k141_8038_8
Type: CAZyme
Location: 12290 - 13678 (+)
Gene ID: k141_8038_9
Type: CAZyme
Location: 13713 - 14984 (+)
Gene ID: k141_8038_10
Type: TC
Location: 15198 - 16373 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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