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Cluster: CGMR098611_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_158387 k141_158387_13 11226 13550 + CBM67 | GH78
TC k141_158387 k141_158387_14 13543 14907 + 2.A.2.3.3
pfam k141_158387 k141_158387_15 14911 15807 + ROK
TC k141_158387 k141_158387_16 15828 17093 + 2.A.1.1.27
TF k141_158387 k141_158387_17 17214 17498 + HTH_5
TC k141_158387 k141_158387_18 17639 19000 + 2.A.1.3.49
STP k141_158387 k141_158387_19 19174 19764 - TetR_N
TC k141_158387 k141_158387_20 19853 21280 + 2.A.1.3.51
Gene ID: k141_158387_13
Type: CAZyme
Location: 11226 - 13550 (+)
Gene ID: k141_158387_14
Type: TC
Location: 13543 - 14907 (+)
Gene ID: k141_158387_15
Type: pfam
Location: 14911 - 15807 (+)
Gene ID: k141_158387_16
Type: TC
Location: 15828 - 17093 (+)
Gene ID: k141_158387_17
Type: TF
Location: 17214 - 17498 (+)
Gene ID: k141_158387_18
Type: TC
Location: 17639 - 19000 (+)
Gene ID: k141_158387_19
Type: STP
Location: 19174 - 19764 (-)
Gene ID: k141_158387_20
Type: TC
Location: 19853 - 21280 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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