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Cluster: CGMR098611_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_139152 k141_139152_34 27057 28598 + GT4
CAZyme k141_139152 k141_139152_35 28598 30109 + GT4
TF k141_139152 k141_139152_36 30172 30996 - HTH_1
TC k141_139152 k141_139152_37 31142 32152 + 2.A.98.1.4
pfam k141_139152 k141_139152_38 32217 32723 - DUF4811
TC k141_139152 k141_139152_39 32720 34204 - 2.A.1.3.61
pfam k141_139152 k141_139152_40 34381 35046 + Hydrolase | HAD | HAD_2
TC k141_139152 k141_139152_41 35172 35543 + 2.A.1.36.3
Gene ID: k141_139152_34
Type: CAZyme
Location: 27057 - 28598 (+)
Gene ID: k141_139152_35
Type: CAZyme
Location: 28598 - 30109 (+)
Gene ID: k141_139152_36
Type: TF
Location: 30172 - 30996 (-)
Gene ID: k141_139152_37
Type: TC
Location: 31142 - 32152 (+)
Gene ID: k141_139152_38
Type: pfam
Location: 32217 - 32723 (-)
Gene ID: k141_139152_39
Type: TC
Location: 32720 - 34204 (-)
Gene ID: k141_139152_40
Type: pfam
Location: 34381 - 35046 (+)
Gene ID: k141_139152_41
Type: TC
Location: 35172 - 35543 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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