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Cluster: CGMR098611_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_47927 k141_47927_4 4009 6297 - GH31_3
TC k141_47927 k141_47927_5 6648 7892 + 4.A.3.2.2
CAZyme k141_47927 k141_47927_6 7918 8706 + CE1
pfam k141_47927 k141_47927_7 8706 9590 + ROK
TF k141_47927 k141_47927_8 9685 10491 + HTH_AraC
TC k141_47927 k141_47927_9 10838 11662 - 3.A.1.1.4
TC k141_47927 k141_47927_10 11655 12533 - 3.A.1.1.4
TC k141_47927 k141_47927_11 12581 13888 - 3.A.1.1.4
TF k141_47927 k141_47927_12 14033 14911 - HTH_8
TC k141_47927 k141_47927_13 15066 16187 + 3.A.1.1.20
Gene ID: k141_47927_4
Type: CAZyme
Location: 4009 - 6297 (-)
Gene ID: k141_47927_5
Type: TC
Location: 6648 - 7892 (+)
Gene ID: k141_47927_6
Type: CAZyme
Location: 7918 - 8706 (+)
Gene ID: k141_47927_7
Type: pfam
Location: 8706 - 9590 (+)
Gene ID: k141_47927_8
Type: TF
Location: 9685 - 10491 (+)
Gene ID: k141_47927_9
Type: TC
Location: 10838 - 11662 (-)
Gene ID: k141_47927_10
Type: TC
Location: 11655 - 12533 (-)
Gene ID: k141_47927_11
Type: TC
Location: 12581 - 13888 (-)
Gene ID: k141_47927_12
Type: TF
Location: 14033 - 14911 (-)
Gene ID: k141_47927_13
Type: TC
Location: 15066 - 16187 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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