Cluster: CGMR098611_CGC29
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR098611
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_152920 | k141_152920_1 | 1029 | 1538 | - | GH13_31 |
| TC | k141_152920 | k141_152920_2 | 2055 | 3461 | + | 2.A.35.1.3 |
| pfam | k141_152920 | k141_152920_3 | 3582 | 4496 | + | ADH_zinc_N | ADH_N |
| NULL(UNKNOWN) | k141_152920 | k141_152920_4 | 5117 | 5395 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_152920 | k141_152920_5 | 5861 | 8131 | - | GH65 |
| TC | k141_152920 | k141_152920_6 | 8156 | 9262 | - | 3.A.1.1.28 |
| CAZyme | k141_152920 | k141_152920_7 | 9364 | 10686 | - | GH13 |
| NULL(UNKNOWN) | k141_152920 | k141_152920_8 | 10724 | 11560 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_152920 | k141_152920_9 | 11588 | 12469 | - | 3.A.1.1.26 |
| TC | k141_152920 | k141_152920_10 | 12473 | 13762 | - | 3.A.1.1.26 |
| TC | k141_152920 | k141_152920_11 | 13877 | 15133 | - | 3.A.1.1.26 |
| CAZyme | k141_152920 | k141_152920_12 | 15390 | 17063 | - | GH13_31 |
| TF | k141_152920 | k141_152920_13 | 17080 | 18042 | - | LacI |
| TF | k141_152920 | k141_152920_14 | 18087 | 19106 | - | LacI |
| TC | k141_152920 | k141_152920_15 | 19370 | 19888 | + | 3.A.1.26.10 |
Gene ID: k141_152920_1
Type: CAZyme
Location: 1029 - 1538 (-)
Type: CAZyme
Location: 1029 - 1538 (-)
Gene ID: k141_152920_2
Type: TC
Location: 2055 - 3461 (+)
Type: TC
Location: 2055 - 3461 (+)
Gene ID: k141_152920_3
Type: pfam
Location: 3582 - 4496 (+)
Type: pfam
Location: 3582 - 4496 (+)
Gene ID: k141_152920_4
Type:
Location: 5117 - 5395 (-)
Type:
Location: 5117 - 5395 (-)
Gene ID: k141_152920_5
Type: CAZyme
Location: 5861 - 8131 (-)
Type: CAZyme
Location: 5861 - 8131 (-)
Gene ID: k141_152920_6
Type: TC
Location: 8156 - 9262 (-)
Type: TC
Location: 8156 - 9262 (-)
Gene ID: k141_152920_7
Type: CAZyme
Location: 9364 - 10686 (-)
Type: CAZyme
Location: 9364 - 10686 (-)
Gene ID: k141_152920_8
Type:
Location: 10724 - 11560 (-)
Type:
Location: 10724 - 11560 (-)
Gene ID: k141_152920_9
Type: TC
Location: 11588 - 12469 (-)
Type: TC
Location: 11588 - 12469 (-)
Gene ID: k141_152920_10
Type: TC
Location: 12473 - 13762 (-)
Type: TC
Location: 12473 - 13762 (-)
Gene ID: k141_152920_11
Type: TC
Location: 13877 - 15133 (-)
Type: TC
Location: 13877 - 15133 (-)
Gene ID: k141_152920_12
Type: CAZyme
Location: 15390 - 17063 (-)
Type: CAZyme
Location: 15390 - 17063 (-)
Gene ID: k141_152920_13
Type: TF
Location: 17080 - 18042 (-)
Type: TF
Location: 17080 - 18042 (-)
Gene ID: k141_152920_14
Type: TF
Location: 18087 - 19106 (-)
Type: TF
Location: 18087 - 19106 (-)
Gene ID: k141_152920_15
Type: TC
Location: 19370 - 19888 (+)
Type: TC
Location: 19370 - 19888 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.