Cluster: CGMR098611_CGC20
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR098611
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_83368 | k141_83368_15 | 17991 | 18998 | - | 3.A.1.20.1 |
| pfam | k141_83368 | k141_83368_16 | 19025 | 20095 | - | SBP_bac_1 | SBP_bac_8 |
| TC | k141_83368 | k141_83368_17 | 20396 | 21499 | - | 3.A.1.1.20 |
| TF | k141_83368 | k141_83368_18 | 21542 | 22558 | - | LacI |
| TC | k141_83368 | k141_83368_19 | 22586 | 23416 | - | 3.A.1.1.34 |
| TC | k141_83368 | k141_83368_20 | 23429 | 24358 | - | 3.A.1.1.4 |
| STP | k141_83368 | k141_83368_21 | 24520 | 25788 | - | SBP_bac_1 |
| CAZyme | k141_83368 | k141_83368_22 | 25811 | 28138 | - | GH65 |
| NULL(UNKNOWN) | k141_83368 | k141_83368_23 | 28154 | 28417 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_83368 | k141_83368_24 | 28426 | 28845 | - | RDD |
| CAZyme | k141_83368 | k141_83368_25 | 29067 | 31253 | - | GH65 |
| CAZyme | k141_83368 | k141_83368_26 | 31469 | 35569 | - | GH13_14 |
Gene ID: k141_83368_15
Type: TC
Location: 17991 - 18998 (-)
Type: TC
Location: 17991 - 18998 (-)
Gene ID: k141_83368_16
Type: pfam
Location: 19025 - 20095 (-)
Type: pfam
Location: 19025 - 20095 (-)
Gene ID: k141_83368_17
Type: TC
Location: 20396 - 21499 (-)
Type: TC
Location: 20396 - 21499 (-)
Gene ID: k141_83368_18
Type: TF
Location: 21542 - 22558 (-)
Type: TF
Location: 21542 - 22558 (-)
Gene ID: k141_83368_19
Type: TC
Location: 22586 - 23416 (-)
Type: TC
Location: 22586 - 23416 (-)
Gene ID: k141_83368_20
Type: TC
Location: 23429 - 24358 (-)
Type: TC
Location: 23429 - 24358 (-)
Gene ID: k141_83368_21
Type: STP
Location: 24520 - 25788 (-)
Type: STP
Location: 24520 - 25788 (-)
Gene ID: k141_83368_22
Type: CAZyme
Location: 25811 - 28138 (-)
Type: CAZyme
Location: 25811 - 28138 (-)
Gene ID: k141_83368_23
Type:
Location: 28154 - 28417 (-)
Type:
Location: 28154 - 28417 (-)
Gene ID: k141_83368_24
Type: pfam
Location: 28426 - 28845 (-)
Type: pfam
Location: 28426 - 28845 (-)
Gene ID: k141_83368_25
Type: CAZyme
Location: 29067 - 31253 (-)
Type: CAZyme
Location: 29067 - 31253 (-)
Gene ID: k141_83368_26
Type: CAZyme
Location: 31469 - 35569 (-)
Type: CAZyme
Location: 31469 - 35569 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactiplantibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.