Cluster: CGMR098444_CGC27
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR098444
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4942 | k141_4942_15 | 22881 | 24359 | + | 2.A.25.1.3 |
| pfam | k141_4942 | k141_4942_16 | 24372 | 25733 | - | MatE | MatE |
| TC | k141_4942 | k141_4942_17 | 25874 | 27610 | - | 3.A.1.21.1 |
| TC | k141_4942 | k141_4942_18 | 27824 | 29590 | - | 3.A.1.21.1 |
| STP | k141_4942 | k141_4942_19 | 29827 | 30444 | - | TetR_N |
| TC | k141_4942 | k141_4942_20 | 30530 | 32191 | - | 8.A.7.1.1 |
| STP | k141_4942 | k141_4942_21 | 32207 | 32473 | - | PTS-HPr |
| CAZyme | k141_4942 | k141_4942_22 | 32470 | 33972 | - | GH1 |
| TC | k141_4942 | k141_4942_23 | 33972 | 35264 | - | 4.A.3.2.8 |
| TC | k141_4942 | k141_4942_24 | 35314 | 35613 | - | 4.A.3.2.6 |
| TC | k141_4942 | k141_4942_25 | 35635 | 35952 | - | 4.A.3.2.1 |
Gene ID: k141_4942_15
Type: TC
Location: 22881 - 24359 (+)
Type: TC
Location: 22881 - 24359 (+)
Gene ID: k141_4942_16
Type: pfam
Location: 24372 - 25733 (-)
Type: pfam
Location: 24372 - 25733 (-)
Gene ID: k141_4942_17
Type: TC
Location: 25874 - 27610 (-)
Type: TC
Location: 25874 - 27610 (-)
Gene ID: k141_4942_18
Type: TC
Location: 27824 - 29590 (-)
Type: TC
Location: 27824 - 29590 (-)
Gene ID: k141_4942_19
Type: STP
Location: 29827 - 30444 (-)
Type: STP
Location: 29827 - 30444 (-)
Gene ID: k141_4942_20
Type: TC
Location: 30530 - 32191 (-)
Type: TC
Location: 30530 - 32191 (-)
Gene ID: k141_4942_21
Type: STP
Location: 32207 - 32473 (-)
Type: STP
Location: 32207 - 32473 (-)
Gene ID: k141_4942_22
Type: CAZyme
Location: 32470 - 33972 (-)
Type: CAZyme
Location: 32470 - 33972 (-)
Gene ID: k141_4942_23
Type: TC
Location: 33972 - 35264 (-)
Type: TC
Location: 33972 - 35264 (-)
Gene ID: k141_4942_24
Type: TC
Location: 35314 - 35613 (-)
Type: TC
Location: 35314 - 35613 (-)
Gene ID: k141_4942_25
Type: TC
Location: 35635 - 35952 (-)
Type: TC
Location: 35635 - 35952 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor acetigignens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_4942_19 | vegetarian > omnivore | 1.19963 | 0.00760 |
| k141_4942_20 | vegetarian > vegan | 2.38417 | 0.00566 |
| k141_4942_21 | vegetarian > vegan | 3.18742 | 0.00566 |
| k141_4942_23 | vegetarian > vegan | 1.65336 | 0.00566 |
| k141_4942_24 | vegetarian > vegan | 2.35276 | 0.00566 |
| k141_4942_25 | vegetarian > vegan | 3.62888 | 0.00566 |