Cluster: CGMR096096_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096096
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_129991 | k141_129991_15 | 15785 | 18520 | - | 3.A.5.1.1 |
| pfam | k141_129991 | k141_129991_16 | 18843 | 19343 | + | DciA |
| CAZyme | k141_129991 | k141_129991_17 | 19404 | 20315 | - | CE11 |
Gene ID: k141_129991_15
Type: TC
Location: 15785 - 18520 (-)
Type: TC
Location: 15785 - 18520 (-)
Gene ID: k141_129991_16
Type: pfam
Location: 18843 - 19343 (+)
Type: pfam
Location: 18843 - 19343 (+)
Gene ID: k141_129991_17
Type: CAZyme
Location: 19404 - 20315 (-)
Type: CAZyme
Location: 19404 - 20315 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.