Cluster: CGMR096096_CGC32
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096096
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2012 | k141_2012_54 | 56707 | 57909 | - | 2.A.1.11.2 |
| TF | k141_2012 | k141_2012_55 | 57975 | 58379 | - | MarR |
| CAZyme | k141_2012 | k141_2012_56 | 58433 | 59632 | - | GH5_48 |
Gene ID: k141_2012_54
Type: TC
Location: 56707 - 57909 (-)
Type: TC
Location: 56707 - 57909 (-)
Gene ID: k141_2012_55
Type: TF
Location: 57975 - 58379 (-)
Type: TF
Location: 57975 - 58379 (-)
Gene ID: k141_2012_56
Type: CAZyme
Location: 58433 - 59632 (-)
Type: CAZyme
Location: 58433 - 59632 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.