dbCAN Logo

Cluster: CGMR096096_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_56432 k141_56432_21 21761 22939 - 3.A.1.122.2
TC k141_56432 k141_56432_22 22929 23597 - 3.A.1.125.1
NULL(UNKNOWN) k141_56432 k141_56432_23 23594 24001 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_56432 k141_56432_24 25905 27221 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme k141_56432 k141_56432_25 27284 28765 + GT2
pfam k141_56432 k141_56432_26 28805 29971 + PilZ | HlyD_3
pfam k141_56432 k141_56432_27 29984 31423 + Sel1 | Sel1 | Sel1 | Sel1
TC k141_56432 k141_56432_28 31420 32898 + 1.B.13.1.1
Gene ID: k141_56432_21
Type: TC
Location: 21761 - 22939 (-)
Gene ID: k141_56432_22
Type: TC
Location: 22929 - 23597 (-)
Gene ID: k141_56432_23
Type:
Location: 23594 - 24001 (-)
Gene ID: k141_56432_24
Type: pfam
Location: 25905 - 27221 (+)
Gene ID: k141_56432_25
Type: CAZyme
Location: 27284 - 28765 (+)
Gene ID: k141_56432_26
Type: pfam
Location: 28805 - 29971 (+)
Gene ID: k141_56432_27
Type: pfam
Location: 29984 - 31423 (+)
Gene ID: k141_56432_28
Type: TC
Location: 31420 - 32898 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List