Cluster: CGMR096096_CGC26
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096096
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_86458 | k141_86458_1 | 2 | 1837 | + | GT35 |
| pfam | k141_86458 | k141_86458_2 | 2014 | 3024 | + | FBPase | FBPase_C |
| pfam | k141_86458 | k141_86458_3 | 3028 | 3624 | + | DUF924 |
| TC | k141_86458 | k141_86458_4 | 3678 | 5570 | - | 1.B.52.2.1 |
Gene ID: k141_86458_1
Type: CAZyme
Location: 2 - 1837 (+)
Type: CAZyme
Location: 2 - 1837 (+)
Gene ID: k141_86458_2
Type: pfam
Location: 2014 - 3024 (+)
Type: pfam
Location: 2014 - 3024 (+)
Gene ID: k141_86458_3
Type: pfam
Location: 3028 - 3624 (+)
Type: pfam
Location: 3028 - 3624 (+)
Gene ID: k141_86458_4
Type: TC
Location: 3678 - 5570 (-)
Type: TC
Location: 3678 - 5570 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.