Cluster: CGMR096096_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096096
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_70146 | k141_70146_9 | 6667 | 7476 | - | 3.A.1.5.3 |
| TC | k141_70146 | k141_70146_10 | 7473 | 8243 | - | 3.A.1.5.3 |
| TC | k141_70146 | k141_70146_11 | 8244 | 9089 | - | 3.A.1.5.3 |
| TC | k141_70146 | k141_70146_12 | 9086 | 10027 | - | 3.A.1.5.3 |
| TC | k141_70146 | k141_70146_13 | 10031 | 11593 | - | 3.A.1.5.3 |
| CAZyme | k141_70146 | k141_70146_14 | 11820 | 12926 | + | GH109 |
Gene ID: k141_70146_9
Type: TC
Location: 6667 - 7476 (-)
Type: TC
Location: 6667 - 7476 (-)
Gene ID: k141_70146_10
Type: TC
Location: 7473 - 8243 (-)
Type: TC
Location: 7473 - 8243 (-)
Gene ID: k141_70146_11
Type: TC
Location: 8244 - 9089 (-)
Type: TC
Location: 8244 - 9089 (-)
Gene ID: k141_70146_12
Type: TC
Location: 9086 - 10027 (-)
Type: TC
Location: 9086 - 10027 (-)
Gene ID: k141_70146_13
Type: TC
Location: 10031 - 11593 (-)
Type: TC
Location: 10031 - 11593 (-)
Gene ID: k141_70146_14
Type: CAZyme
Location: 11820 - 12926 (+)
Type: CAZyme
Location: 11820 - 12926 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.