Cluster: CGMR096096_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096096
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_160751 | k141_160751_50 | 45338 | 46957 | - | 2.A.1.6.11 |
| CAZyme | k141_160751 | k141_160751_51 | 47055 | 48704 | - | AA3_2 |
| TF | k141_160751 | k141_160751_52 | 48871 | 49758 | + | HTH_1 |
| TC | k141_160751 | k141_160751_53 | 49747 | 50601 | - | 2.A.102.4.2 |
Gene ID: k141_160751_50
Type: TC
Location: 45338 - 46957 (-)
Type: TC
Location: 45338 - 46957 (-)
Gene ID: k141_160751_51
Type: CAZyme
Location: 47055 - 48704 (-)
Type: CAZyme
Location: 47055 - 48704 (-)
Gene ID: k141_160751_52
Type: TF
Location: 48871 - 49758 (+)
Type: TF
Location: 48871 - 49758 (+)
Gene ID: k141_160751_53
Type: TC
Location: 49747 - 50601 (-)
Type: TC
Location: 49747 - 50601 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.