Cluster: CGMR096096_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096096
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_131203 | k141_131203_22 | 17369 | 17995 | + | GH19 |
| NULL(UNKNOWN) | k141_131203 | k141_131203_23 | 17992 | 18354 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_131203 | k141_131203_24 | 18351 | 18623 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_131203 | k141_131203_25 | 18758 | 19516 | + | 1.A.87.2.1 |
Gene ID: k141_131203_22
Type: CAZyme
Location: 17369 - 17995 (+)
Type: CAZyme
Location: 17369 - 17995 (+)
Gene ID: k141_131203_23
Type:
Location: 17992 - 18354 (+)
Type:
Location: 17992 - 18354 (+)
Gene ID: k141_131203_24
Type:
Location: 18351 - 18623 (+)
Type:
Location: 18351 - 18623 (+)
Gene ID: k141_131203_25
Type: TC
Location: 18758 - 19516 (+)
Type: TC
Location: 18758 - 19516 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.