Cluster: CGMR096096_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096096
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_58854 | k141_58854_2 | 2645 | 3802 | + | 3.A.1.122.12 |
| TC | k141_58854 | k141_58854_3 | 3805 | 5808 | + | 3.A.1.122.12 |
| TF | k141_58854 | k141_58854_4 | 5872 | 6516 | - | GerE |
| CAZyme | k141_58854 | k141_58854_5 | 6777 | 7409 | - | PL7_1 |
Gene ID: k141_58854_2
Type: TC
Location: 2645 - 3802 (+)
Type: TC
Location: 2645 - 3802 (+)
Gene ID: k141_58854_3
Type: TC
Location: 3805 - 5808 (+)
Type: TC
Location: 3805 - 5808 (+)
Gene ID: k141_58854_4
Type: TF
Location: 5872 - 6516 (-)
Type: TF
Location: 5872 - 6516 (-)
Gene ID: k141_58854_5
Type: CAZyme
Location: 6777 - 7409 (-)
Type: CAZyme
Location: 6777 - 7409 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.