Cluster: CGMR096096_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR096096
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_135114 | k141_135114_1 | 1 | 915 | - | GH88 |
| TC | k141_135114 | k141_135114_2 | 899 | 2077 | - | 2.A.1.13.21 |
| pfam | k141_135114 | k141_135114_3 | 2074 | 3282 | - | Acyl-CoA_dh_1 | Acyl-CoA_dh_M | Acyl-CoA_dh_N | Acyl-CoA_dh_2 |
| TC | k141_135114 | k141_135114_4 | 3286 | 4935 | - | 4.C.1.1.6 |
Gene ID: k141_135114_1
Type: CAZyme
Location: 1 - 915 (-)
Type: CAZyme
Location: 1 - 915 (-)
Gene ID: k141_135114_2
Type: TC
Location: 899 - 2077 (-)
Type: TC
Location: 899 - 2077 (-)
Gene ID: k141_135114_3
Type: pfam
Location: 2074 - 3282 (-)
Type: pfam
Location: 2074 - 3282 (-)
Gene ID: k141_135114_4
Type: TC
Location: 3286 - 4935 (-)
Type: TC
Location: 3286 - 4935 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas_E
Species
Pseudomonas_E shirazensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.